Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   CURT_RS00950 Genome accession   NZ_CP053832
Coordinates   174351..175394 (-) Length   347 a.a.
NCBI ID   WP_018712567.1    Uniprot ID   A0A381EDC9
Organism   Campylobacter ureolyticus strain LMG 6451     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 169351..180394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CURT_RS00915 (CURT_0181) - 170104..170682 (+) 579 WP_244848421.1 molybdenum ABC transporter permease -
  CURT_RS00920 - 170679..170921 (+) 243 WP_018712573.1 hypothetical protein -
  CURT_RS00925 - 170988..171512 (+) 525 WP_255199045.1 hypothetical protein -
  CURT_RS00930 (CURT_0183) - 171546..172064 (+) 519 WP_018712571.1 cysteine hydrolase family protein -
  CURT_RS00935 (CURT_0184) thiD 172098..172856 (-) 759 WP_018712570.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CURT_RS00940 (CURT_0185) - 172853..173098 (-) 246 WP_018712569.1 hypothetical protein -
  CURT_RS00945 (CURT_0186) eno 173105..174358 (-) 1254 WP_026320291.1 phosphopyruvate hydratase -
  CURT_RS00950 (CURT_0187) recA 174351..175394 (-) 1044 WP_018712567.1 recombinase RecA Machinery gene
  CURT_RS00955 (CURT_0188) - 175495..176364 (+) 870 WP_018712566.1 menaquinone biosynthesis family protein -
  CURT_RS00960 (CURT_0189) - 176358..177131 (+) 774 WP_018712565.1 UDP-N-acetylmuramate dehydrogenase -
  CURT_RS00965 (CURT_0190) - 177128..177931 (+) 804 WP_018712564.1 hypothetical protein -
  CURT_RS00970 (CURT_0191) - 177942..178100 (-) 159 WP_018712563.1 hypothetical protein -
  CURT_RS00975 (CURT_0192) - 178280..179065 (-) 786 WP_018712562.1 3'(2'),5'-bisphosphate nucleotidase CysQ -

Sequence

Protein


Download         Length: 347 a.a.        Molecular weight: 37632.89 Da        Isoelectric Point: 4.9575

>NTDB_id=448008 CURT_RS00950 WP_018712567.1 174351..175394(-) (recA) [Campylobacter ureolyticus strain LMG 6451]
MDEKKKKALDLALKQIDKSFGKGTLLRLGDKEVEPIDSISTGSLGLDIALGIGGVPKGRIIEIYGPESSGKTTLTLHIVA
ECQKQGGVCAFVDAEHALDVKYAANLGVDTENLYVSQPDFGEQALDIVETLARSGAVDLIIVDSVAALTPKTEIEGDMGD
THVGLQARLMSQALRKLAGIVHKMGTTVVFINQIRMKIGMIGYGSPETTTGGNALKFYSSVRLDVRRIATLKQNDQSIGN
RVRVKVAKNKVAPPFKQAEFDIMFGEGISKTGEIIDYGVKLDIIDKSGAWFSYKADKLGQGRENARNFLLQNPEISKEIE
NQILEHLGEQGILSSGDDDEIQEQNDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=448008 CURT_RS00950 WP_018712567.1 174351..175394(-) (recA) [Campylobacter ureolyticus strain LMG 6451]
ATGGATGAAAAAAAGAAAAAAGCACTTGATTTAGCCCTAAAACAAATCGATAAATCATTTGGCAAAGGCACACTTCTAAG
ACTTGGAGATAAAGAAGTTGAGCCAATTGATAGTATCTCAACAGGATCTCTTGGACTTGATATAGCTCTTGGAATTGGCG
GTGTTCCAAAAGGTAGAATAATCGAAATTTATGGACCAGAAAGTAGCGGTAAAACAACTCTTACGCTTCATATTGTAGCT
GAGTGTCAAAAACAAGGTGGAGTTTGTGCATTCGTTGATGCAGAACACGCTCTTGATGTAAAATATGCTGCAAATTTAGG
CGTAGATACTGAAAATTTATATGTTTCACAGCCTGATTTTGGTGAGCAAGCCCTAGATATAGTTGAAACACTAGCAAGAA
GTGGTGCTGTTGATTTGATAATTGTTGATAGTGTTGCAGCACTTACTCCAAAGACTGAAATTGAGGGAGATATGGGTGAT
ACTCATGTTGGACTTCAAGCAAGACTTATGTCTCAAGCTCTTAGAAAACTTGCCGGAATTGTGCATAAAATGGGCACAAC
TGTTGTATTTATAAATCAAATTAGAATGAAAATAGGAATGATAGGCTATGGTTCACCAGAAACCACAACCGGTGGAAATG
CACTTAAATTCTACTCATCTGTAAGACTTGATGTAAGAAGAATAGCAACTTTAAAACAAAATGATCAAAGTATAGGAAAC
AGAGTAAGAGTAAAAGTTGCAAAAAATAAAGTAGCTCCACCATTTAAACAGGCTGAATTTGACATAATGTTTGGTGAGGG
AATTAGCAAAACTGGTGAAATAATTGATTATGGTGTAAAGCTTGACATTATTGATAAAAGCGGTGCTTGGTTTAGCTATA
AAGCCGATAAACTCGGTCAAGGAAGAGAGAACGCAAGAAATTTCTTACTACAAAATCCAGAAATTTCAAAAGAGATAGAA
AATCAAATTTTAGAACACTTGGGAGAACAAGGAATTCTATCAAGTGGCGATGATGACGAAATACAGGAGCAAAATGATGA
TTAG

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A381EDC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

79.3

98.847

0.784
  recA Helicobacter pylori 26695

74.052

98.847

0.732
  recA Helicobacter pylori strain NCTC11637

73.761

98.847

0.729
  recA Neisseria gonorrhoeae MS11

65.396

98.271

0.643
  recA Neisseria gonorrhoeae strain FA1090

65.396

98.271

0.643
  recA Neisseria gonorrhoeae MS11

65.396

98.271

0.643
  recA Pseudomonas stutzeri DSM 10701

65.749

94.236

0.62
  recA Acinetobacter baylyi ADP1

61.272

99.712

0.611
  recA Acinetobacter baumannii D1279779

60.807

100

0.608
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.952

95.677

0.602
  recA Bacillus subtilis subsp. subtilis str. 168

64.506

93.372

0.602
  recA Glaesserella parasuis strain SC1401

63.19

93.948

0.594
  recA Ralstonia pseudosolanacearum GMI1000

64.856

90.202

0.585
  recA Vibrio cholerae strain A1552

60.856

94.236

0.573
  recA Vibrio cholerae O1 biovar El Tor strain E7946

60.856

94.236

0.573
  recA Latilactobacillus sakei subsp. sakei 23K

56.447

100

0.568
  recA Streptococcus mitis NCTC 12261

59.271

94.813

0.562
  recA Streptococcus mitis SK321

58.967

94.813

0.559
  recA Streptococcus pneumoniae TIGR4

58.663

94.813

0.556
  recA Streptococcus pneumoniae Rx1

58.663

94.813

0.556
  recA Streptococcus pneumoniae D39

58.663

94.813

0.556
  recA Streptococcus pneumoniae R6

58.663

94.813

0.556
  recA Streptococcus pyogenes NZ131

58.485

95.101

0.556
  recA Streptococcus mutans UA159

58.485

95.101

0.556
  recA Lactococcus lactis subsp. cremoris KW2

58.025

93.372

0.542
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

54.601

93.948

0.513