Detailed information NTG0043983

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SAVC_RS05990
• Genome accession: NC_016912
• Coordinates: 1215018..1216061 (+)
• Length: 347 a.a.
• NCBI ID: WP_000368166.1
• Uniprot ID: P68845
• Organism: Staphylococcus aureus subsp. aureus VC40
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1210018..1221061

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAVC_RS05965 (SAVC_05565)	ymfI	1210816..1211520 (+)	705	WP_000646227.1	elongation factor P 5-aminopentanone reductase	-
SAVC_RS05970 (SAVC_05570)	-	1211625..1212452 (+)	828	WP_000214890.1	YmfK family protein	-
SAVC_RS05975 (SAVC_05575)	-	1212471..1212863 (+)	393	WP_000859443.1	RodZ family helix-turn-helix domain-containing protein	-
SAVC_RS05980 (SAVC_05580)	pgsA	1212897..1213475 (+)	579	WP_001025093.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SAVC_RS05985 (SAVC_05585)	-	1213702..1214853 (+)	1152	WP_000020361.1	CinA family nicotinamide mononucleotide deamidase-related protein	-
SAVC_RS05990 (SAVC_05590)	recA	1215018..1216061 (+)	1044	WP_000368166.1	recombinase RecA	Machinery gene
SAVC_RS05995 (SAVC_05595)	rny	1216415..1217974 (+)	1560	WP_001050913.1	ribonuclease Y	-
SAVC_RS06000 (SAVC_05600)	-	1218271..1218486 (-)	216	WP_000026308.1	hypothetical protein	-
SAVC_RS06005 (SAVC_05605)	-	1218660..1219457 (+)	798	WP_001222105.1	TIGR00282 family metallophosphoesterase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37656.53 Da
• Isoelectric Point: 4.8509

>NTDB_id=43983 SAVC_RS05990 WP_000368166.1 1215018..1216061(+) (recA) [Staphylococcus aureus subsp. aureus VC40]
MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQSNGGVAAFIDAEHALDPEYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGKENVKMYLKENPQIKEEIDR
KLREKLGISDGDVEETEDAPKSLFDEE

Nucleotide

• Length: 1044 bp

>NTDB_id=43983 SAVC_RS05990 WP_000368166.1 1215018..1216061(+) (recA) [Staphylococcus aureus subsp. aureus VC40]
TTGGATAACGATCGTCAAAAAGCTTTAGATACAGTAATTAAAAATATGGAGAAATCTTTCGGTAAAGGTGCCGTAATGAA
GTTGGGTGACAATATAGGTCGCCGAGTTTCAACTACATCAACTGGTTCAGTTACATTAGATAATGCGCTAGGTGTAGGTG
GCTATCCTAAAGGACGAATTATTGAAATTTATGGTCCTGAAAGTTCTGGTAAGACAACAGTAGCGCTTCACGCTATTGCT
GAAGTACAAAGTAATGGCGGGGTGGCAGCATTTATCGATGCTGAACATGCTTTAGATCCAGAATATGCTCAAGCATTAGG
CGTAGATATCGATAATTTATATTTATCGCAACCGGATCATGGTGAACAAGGTCTTGAAATCGCCGAAGCATTTGTTAGAA
GTGGTGCAGTTGATATTGTAGTTGTAGACTCAGTTGCTGCTTTAACACCTAAAGCTGAAATTGAAGGAGAAATGGGAGAC
ACTCACGTTGGTTTACAAGCTCGTTTAATGTCACAAGCGTTACGTAAACTTTCAGGTGCTATTTCTAAATCAAATACAAC
TGCTATTTTCATCAACCAAATTCGTGAAAAAGTTGGTGTTATGTTCGGTAATCCAGAGACTACACCAGGTGGACGTGCAT
TAAAATTCTATAGTTCAGTAAGACTAGAAGTACGTCGTGCAGAACAGCTTAAACAAGGACAAGAAATTGTAGGTAATAGA
ACTAAAATTAAAGTCGTTAAAAATAAAGTGGCACCACCATTTAGAGTAGCTGAAGTTGATATTATGTATGGACAAGGTAT
TTCTAAAGAGGGTGAACTTATTGATTTAGGTGTTGAAAACGACATCGTTGATAAATCAGGAGCATGGTATTCTTACAATG
GCGAACGAATGGGTCAAGGTAAGGAAAATGTTAAAATGTACTTGAAAGAAAATCCACAAATTAAAGAAGAAATTGATCGT
AAATTGAGAGAAAAATTAGGTATATCTGATGGTGATGTTGAAGAAACAGAAGATGCACCAAAGTCATTATTTGACGAAGA
ATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: P68845

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	76.435	95.389	0.729
recA	Latilactobacillus sakei subsp. sakei 23K	70.206	97.695	0.686
recA	Streptococcus pneumoniae D39	64.943	100	0.651
recA	Streptococcus pneumoniae Rx1	64.943	100	0.651
recA	Streptococcus pneumoniae TIGR4	64.943	100	0.651
recA	Streptococcus pneumoniae R6	64.943	100	0.651
recA	Streptococcus pyogenes NZ131	68.389	94.813	0.648
recA	Acinetobacter baumannii D1279779	64.368	100	0.646
recA	Streptococcus mutans UA159	64	100	0.646
recA	Streptococcus mitis SK321	64.553	100	0.646
recA	Acinetobacter baylyi ADP1	64.265	100	0.643
recA	Neisseria gonorrhoeae MS11	65.192	97.695	0.637
recA	Neisseria gonorrhoeae MS11	65.192	97.695	0.637
recA	Neisseria gonorrhoeae strain FA1090	65.192	97.695	0.637
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.897	97.695	0.634
recA	Streptococcus mitis NCTC 12261	66.066	95.965	0.634
recA	Lactococcus lactis subsp. cremoris KW2	65.559	95.389	0.625
recA	Helicobacter pylori 26695	63.636	98.271	0.625
recA	Helicobacter pylori strain NCTC11637	63.636	98.271	0.625
recA	Vibrio cholerae strain A1552	65.644	93.948	0.617
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.644	93.948	0.617
recA	Ralstonia pseudosolanacearum GMI1000	65.605	90.49	0.594
recA	Pseudomonas stutzeri DSM 10701	61.012	96.83	0.591
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.027	95.389	0.582
recA	Glaesserella parasuis strain SC1401	60.681	93.084	0.565
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.129	91.931	0.562