Detailed information NTG0043943

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SBAL678_RS39915
• Genome accession: NC_016901
• Coordinates: 3796983..3798050 (-)
• Length: 355 a.a.
• NCBI ID: WP_006082606.1
• Uniprot ID: A9KYG0
• Organism: Shewanella baltica OS678
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3791983..3803050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SBAL678_RS39900 (Sbal678_3273)	-	3792234..3793490 (-)	1257	WP_006082603.1	aspartate kinase	-
SBAL678_RS39905 (Sbal678_3274)	alaS	3793500..3796124 (-)	2625	WP_012197439.1	alanine--tRNA ligase	-
SBAL678_RS39910 (Sbal678_3275)	-	3796495..3796965 (-)	471	WP_373419667.1	regulatory protein RecX	-
SBAL678_RS39915 (Sbal678_3276)	recA	3796983..3798050 (-)	1068	WP_006082606.1	recombinase RecA	Machinery gene
SBAL678_RS39920 (Sbal678_3277)	mutS	3798435..3801005 (+)	2571	WP_012197440.1	DNA mismatch repair protein MutS	-
SBAL678_RS39925 (Sbal678_3278)	rpoS	3801209..3802189 (-)	981	WP_006086853.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37942.44 Da
• Isoelectric Point: 4.9553

>NTDB_id=43943 SBAL678_RS39915 WP_006082606.1 3796983..3798050(-) (recA) [Shewanella baltica OS678]
MKVDPNKEKALAAVLIQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVG
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRANAGKYLTENPAIATEI
DKTLRELLLSNPSALAAKDDASTEDNVDLETGEVF

Nucleotide

• Length: 1068 bp

>NTDB_id=43943 SBAL678_RS39915 WP_006082606.1 3796983..3798050(-) (recA) [Shewanella baltica OS678]
ATGAAGGTCGATCCAAATAAAGAGAAAGCACTTGCTGCGGTATTGATCCAAATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGAAGCTGGGCGAAGATCGCTCTATGGATGTTGAGACCATTTCTACCGGTTCTCTGTCTCTGGACGTTGCTTTAGGTG
CTGGCGGTTTGCCAATGGGTCGTATCGTTGAGATCTATGGTCCTGAATCATCAGGTAAAACGACACTGACTTTAGAAGTG
ATTGCCGCAGCGCAACGTGAAGGTAAAACCTGTGCCTTTATCGATGCAGAGCATGCACTCGACCCTATCTATGCTAAAAA
ATTGGGCGTAGATATTGATAACCTTCTGTGTTCACAACCAGATACCGGCGAGCAAGCGCTTGAGATTTGTGATGCATTAA
CTCGCTCAGGCGCTGTTGACGTTATCGTCGTCGACTCAGTGGCGGCATTAACGCCTAAAGCTGAAATCGAAGGCGAAATT
GGTGATTCTCACATGGGCCTAGCGGCACGTATGATGAGCCAAGCTATGCGTAAACTTGCGGGTAACTTAAAGCAATCTAA
CACCTTACTTATCTTCATCAACCAAATCCGGATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACGACAACCGGTGGTA
ACGCGCTGAAGTTCTATGCTTCTGTTCGTTTAGACATTCGTCGTACTGGTGCCATTAAAGACGGCGATGAAGTTGTCGGT
AACGAAACTCGTGTTAAAGTGGTGAAGAACAAGGTTGCAGCACCGTTCAAGCAAGCCGAATTCCAAATCCTTTACGGCCA
AGGTATTAACCGTACTGGTGAGTTAGTTGACTTAGGCGTAGCCCATAAGTTGATTGAAAAAGCGGGTGCTTGGTACAGTT
ATAAAGGTGATAAAATCGGTCAAGGTCGTGCTAATGCGGGTAAATATTTGACTGAAAACCCAGCCATTGCTACTGAAATT
GACAAGACATTACGTGAGTTACTTTTGAGCAATCCTAGTGCATTGGCTGCTAAAGATGATGCTAGCACGGAAGATAATGT
TGATTTAGAAACAGGCGAAGTATTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A9KYG0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	80.98	97.746	0.792
recA	Vibrio cholerae O1 biovar El Tor strain E7946	80.98	97.746	0.792
recA	Pseudomonas stutzeri DSM 10701	71.965	97.465	0.701
recA	Acinetobacter baylyi ADP1	70.317	97.746	0.687
recA	Acinetobacter baumannii D1279779	68.768	98.31	0.676
recA	Glaesserella parasuis strain SC1401	68.571	98.592	0.676
recA	Neisseria gonorrhoeae MS11	69.659	90.986	0.634
recA	Neisseria gonorrhoeae MS11	69.659	90.986	0.634
recA	Neisseria gonorrhoeae strain FA1090	69.659	90.986	0.634
recA	Ralstonia pseudosolanacearum GMI1000	71.111	88.732	0.631
recA	Streptococcus mitis NCTC 12261	60.224	100	0.606
recA	Streptococcus mitis SK321	59.664	100	0.6
recA	Streptococcus pneumoniae D39	63.72	92.394	0.589
recA	Streptococcus pneumoniae TIGR4	63.72	92.394	0.589
recA	Streptococcus pneumoniae R6	63.72	92.394	0.589
recA	Streptococcus pneumoniae Rx1	63.72	92.394	0.589
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.562	93.803	0.577
recA	Helicobacter pylori strain NCTC11637	58.841	97.183	0.572
recA	Streptococcus pyogenes NZ131	61.89	92.394	0.572
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.346	91.268	0.569
recA	Helicobacter pylori 26695	58.551	97.183	0.569
recA	Streptococcus mutans UA159	61.585	92.394	0.569
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	90.423	0.566
recA	Lactococcus lactis subsp. cremoris KW2	60.061	92.394	0.555
recA	Latilactobacillus sakei subsp. sakei 23K	61.755	89.859	0.555
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.27	88.732	0.544