Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | HG561_RS00720 | Genome accession | NZ_CP051506 |
| Coordinates | 146326..147369 (+) | Length | 347 a.a. |
| NCBI ID | WP_000963126.1 | Uniprot ID | K7Y3C2 |
| Organism | Helicobacter pylori strain SHIM-007 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 141326..152369
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HG561_RS00685 (HG561_00680) | - | 141916..142134 (+) | 219 | WP_014534357.1 | cytochrome c oxidase, cbb3-type, CcoQ subunit | - |
| HG561_RS00690 (HG561_00685) | ccoP | 142136..143014 (+) | 879 | WP_202168531.1 | cytochrome-c oxidase, cbb3-type subunit III | - |
| HG561_RS00695 (HG561_00690) | - | 143025..143231 (+) | 207 | WP_000670495.1 | DUF4006 family protein | - |
| HG561_RS00700 (HG561_00695) | - | 143332..143916 (+) | 585 | WP_001222052.1 | hypothetical protein | - |
| HG561_RS00705 (HG561_00700) | - | 143928..144509 (+) | 582 | WP_000660380.1 | hypothetical protein | - |
| HG561_RS00710 (HG561_00705) | - | 144597..145364 (+) | 768 | WP_202168532.1 | hypothetical protein | - |
| HG561_RS00715 (HG561_00710) | - | 145361..146227 (-) | 867 | WP_202168533.1 | menaquinone biosynthesis family protein | - |
| HG561_RS00720 (HG561_00715) | recA | 146326..147369 (+) | 1044 | WP_000963126.1 | recombinase RecA | Machinery gene |
| HG561_RS00725 (HG561_00720) | eno | 147381..148661 (+) | 1281 | WP_202168534.1 | phosphopyruvate hydratase | - |
| HG561_RS00730 (HG561_00725) | - | 148654..148929 (+) | 276 | WP_000146212.1 | hypothetical protein | - |
| HG561_RS00735 (HG561_00730) | - | 148945..149541 (+) | 597 | WP_202168535.1 | AMIN domain-containing protein | - |
| HG561_RS00740 (HG561_00735) | - | 149546..150034 (+) | 489 | WP_001164297.1 | shikimate kinase | - |
| HG561_RS00745 (HG561_00740) | - | 150056..151012 (+) | 957 | WP_202168536.1 | PDC sensor domain-containing protein | - |
| HG561_RS00750 (HG561_00745) | - | 151009..152127 (-) | 1119 | WP_202168537.1 | glycosyltransferase family 8 protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37669.40 Da Isoelectric Point: 5.7176
>NTDB_id=439308 HG561_RS00720 WP_000963126.1 146326..147369(+) (recA) [Helicobacter pylori strain SHIM-007]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME
Nucleotide
Download Length: 1044 bp
>NTDB_id=439308 HG561_RS00720 WP_000963126.1 146326..147369(+) (recA) [Helicobacter pylori strain SHIM-007]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACTCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAAGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATC
ATTGCAGAATGCCAAAAAAATGGGGGCGTGTGCGCGTTTATTGACGCTGAGCATGCCCTAGATGTGCATTATGCTAAGAG
ACTAGGCGTGGATACGGAAAACTTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGCTAAGAAAGATCACCGGTGTTTTGCATAAGATGAA
CACCACTTTAATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAAAACGAACAGCATATT
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCACCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GTTACCAAGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTATTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACCCTTAAGATTAAAGAGAGCATTGGCTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACTCTATTTCTACAGGCTCGTTAGGGTTGGATCTGGCTTTAGGGA
TTGGGGGCGTTCCAAAAGGTAGGATCATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATC
ATTGCAGAATGCCAAAAAAATGGGGGCGTGTGCGCGTTTATTGACGCTGAGCATGCCCTAGATGTGCATTATGCTAAGAG
ACTAGGCGTGGATACGGAAAACTTACTCGTTTCCCAACCTGATACAGGCGAGCAAGCTTTAGAGATTTTAGAAACGATCA
CCAGAAGCGGAGGGATTGATTTAGTGGTGGTGGATTCCGTAGCGGCTCTTACGCCTAAAGCGGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGCTAAGAAAGATCACCGGTGTTTTGCATAAGATGAA
CACCACTTTAATTTTTATCAATCAAATCAGGATGAAGATTGGCATGATGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAATGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGGATTGCGGCTTTAAAACAAAACGAACAGCATATT
GGCAACAGGGCTAAAGCCAAAGTGGTTAAAAATAAAGTCGCTCCACCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAGGGGATTTCTAAAGAGGGCGAAATCATTGATTATGGCGTGAAATTAGACATTGTGGATAAGAGTGGGGCATGGCTTA
GTTACCAAGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTATTGAAAGAAGACAAAGCCCTAGCGAATGAA
ATCACCCTTAAGATTAAAGAGAGCATTGGCTCTAATGAAGAGATCATGCCCTTACCAGATGAGCCTTTAGAAGAAATGGA
ATAG
Similar proteins
Only experimentally validated proteins are listed.