Detailed information NTG0043279

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: SCIM_RS01510
• Genome accession: NC_018073
• Coordinates: 303718..306543 (+)
• Length: 941 a.a.
• NCBI ID: WP_003077752.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 298718..311543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS01480 (SCIM_0257)	rpsF	299831..300121 (+)	291	WP_003077639.1	30S ribosomal protein S6	-
SCIM_RS01485 (SCIM_0258)	ssbA	300133..300603 (+)	471	WP_003074535.1	single-stranded DNA-binding protein	Machinery gene
SCIM_RS01490 (SCIM_0259)	rpsR	300640..300879 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
SCIM_RS01495 (SCIM_0260)	-	301288..301806 (+)	519	Protein_281	GNAT family N-acetyltransferase	-
SCIM_RS01500 (SCIM_0261)	-	301958..302635 (-)	678	WP_003077758.1	DUF1129 domain-containing protein	-
SCIM_RS01505 (SCIM_0262)	-	302651..303595 (-)	945	WP_003070861.1	magnesium transporter CorA family protein	-
SCIM_RS01510 (SCIM_0263)	uvrA	303718..306543 (+)	2826	WP_003077752.1	excinuclease ABC subunit UvrA	Machinery gene
SCIM_RS01515 (SCIM_0264)	-	306581..307336 (-)	756	WP_003077557.1	hypothetical protein	-
SCIM_RS01520 (SCIM_0265)	-	307484..308545 (+)	1062	WP_003077449.1	M24 family metallopeptidase	-
SCIM_RS01525 (SCIM_0266)	efp	308604..309164 (+)	561	WP_003077808.1	elongation factor P	-
SCIM_RS01530 (SCIM_0267)	-	309274..309663 (+)	390	WP_003077589.1	Asp23/Gls24 family envelope stress response protein	-
SCIM_RS01535 (SCIM_0268)	nusB	309656..310081 (+)	426	WP_003077471.1	transcription antitermination factor NusB	-
SCIM_RS01540 (SCIM_0269)	comR/comR2	310113..310595 (+)	483	WP_014829578.1	hypothetical protein	Regulator

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 103788.18 Da
• Isoelectric Point: 6.7407

>NTDB_id=43279 SCIM_RS01510 WP_003077752.1 303718..306543(+) (uvrA) [Streptococcus intermedius JTH08]
MQDKIIIHGARAHNLKNVDVTIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGNMEKPDVDSIDGL
SPAISIDQKTTSKNPRSTVGTATEINDYLRLLYARVGTPYCINGHGAIKASSVEQIVNQVLELPERQRLQILAPVIRKKK
GQHKTIFDKIQKDGYVRVRVDGDIYDVTEVPELSKTKKHDIEVVVDRIVIKKSVRGRLFDSIEAALRLAEGYVVIDTMDG
KELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSDCDGLGIKLEVDLDLVVPDSSKSLREGALAPWNPISSSYYPQML
AQAMEAFGIEMDKPFEELSEEEKQLIFFGSDGREFHFHYENEFGGVRDIDIPFEGVVTNINRRYHETNSDFTRSQMRLYM
NELTCASCHGYRLNPQALSVKVGGEGGVNIGQVSDLSIADHLELLSHLTLTENEVAIATPIIKEIRDRLTFLHNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNNRLIASLKKMRDLGNTLIVVEHDEDTMREADWLI
DVGPGAGVFGGEIVAAGTPEQVAKSKKSITGQYLSGKREIPVPLERRVGNGRFIEVTGAREHNLQNITARFPLGKFIAVT
GVSGSGKSTLVNSILKKAIAQKLNRNSDKPGKFKNISGIEHIDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHYKEKNIAQVLDMTVNDAVEFF
KHIPKIERKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSFYILDEPTTGLHTEDIAKLLQVLSRFVD
DGNTVLVIEHNLDVIKTADHIIDLGPEGGIGGGTIIATGTPEEVAANSASYTGQYLKGKLK

Nucleotide

• Length: 2826 bp

>NTDB_id=43279 SCIM_RS01510 WP_003077752.1 303718..306543(+) (uvrA) [Streptococcus intermedius JTH08]
ATGCAGGATAAAATTATCATTCATGGAGCGCGAGCCCATAATTTAAAAAATGTTGATGTTACGATTCCGCGGGATAAGTT
GGTTGTAGTGACAGGGCTGTCTGGTTCAGGCAAGTCTAGCTTAGCTTTTGATACTCTCTATGCAGAGGGACAACGGCGTT
ATGTAGAAAGCCTGTCGGCTTATGCCCGTCAATTTTTGGGCAACATGGAAAAACCAGATGTGGATTCAATTGACGGTCTT
AGCCCTGCTATTTCCATTGACCAAAAAACGACTAGCAAGAATCCTCGTTCAACAGTCGGAACAGCTACAGAAATCAATGA
TTACCTCCGTTTGCTCTATGCGCGTGTGGGAACTCCATATTGTATCAATGGGCATGGAGCCATTAAAGCTTCTTCTGTAG
AACAAATCGTCAATCAAGTTTTGGAATTACCCGAACGTCAGAGATTACAAATTCTAGCGCCAGTTATCCGTAAGAAAAAA
GGACAGCACAAGACAATCTTTGATAAAATTCAAAAAGATGGATATGTTCGGGTGCGCGTGGATGGAGATATTTATGATGT
AACCGAAGTCCCAGAGCTTTCTAAAACGAAAAAGCACGATATCGAAGTAGTGGTGGATCGGATTGTCATTAAGAAGAGTG
TACGCGGTCGATTATTTGATTCGATTGAAGCAGCTTTAAGGCTTGCGGAAGGTTACGTGGTGATTGATACGATGGATGGC
AAAGAATTACTCTTTTCCGAGCATTATGCCTGTCCAGTCTGTGGTTTTACGGTTCCTGAACTCGAACCGCGCCTTTTCTC
TTTTAATGCCCCATTTGGCTCCTGCTCTGACTGTGACGGCTTAGGTATCAAGTTAGAGGTTGATTTGGATCTTGTAGTGC
CTGATAGTAGTAAATCATTACGTGAAGGAGCTCTAGCACCGTGGAATCCAATTTCTTCTAGTTATTATCCGCAAATGTTA
GCTCAGGCGATGGAAGCCTTTGGCATCGAGATGGATAAGCCTTTTGAGGAATTGAGTGAGGAAGAAAAACAGCTGATTTT
CTTTGGCTCAGATGGTCGAGAGTTCCATTTTCACTATGAAAATGAATTTGGTGGCGTGCGGGATATCGACATCCCTTTTG
AAGGAGTAGTAACCAATATCAACCGCCGCTATCATGAAACTAACAGTGATTTTACCCGTAGCCAAATGCGTCTTTATATG
AATGAGTTGACTTGTGCAAGTTGCCATGGTTATCGATTGAATCCACAAGCCTTGTCTGTTAAAGTGGGGGGTGAAGGTGG
TGTTAATATTGGGCAAGTATCTGATTTGTCTATTGCAGATCATTTAGAATTACTTTCTCATCTGACTTTGACTGAAAATG
AAGTGGCCATTGCAACACCGATTATTAAAGAAATTCGCGATCGCTTGACTTTTCTTCATAATGTCGGGCTTAATTACTTG
ACACTATCTCGTTCTGCTGGAACATTGTCGGGTGGTGAGAGTCAGCGGATTCGCTTGGCAACTCAAATTGGCTCCAATCT
CAGTGGTGTTCTTTATATCTTGGATGAACCCTCTATTGGTCTACACCAGCGGGATAACAATCGCTTGATTGCCAGTCTCA
AAAAAATGCGTGATTTGGGCAATACTCTCATTGTGGTTGAACATGATGAAGATACTATGCGCGAAGCGGATTGGTTGATT
GATGTTGGACCTGGAGCAGGTGTTTTTGGTGGTGAAATTGTTGCGGCAGGCACTCCAGAGCAAGTTGCAAAAAGCAAGAA
ATCAATTACAGGTCAGTATTTATCGGGCAAACGTGAAATTCCAGTGCCATTGGAGCGCCGCGTAGGAAACGGCCGCTTTA
TTGAAGTAACAGGTGCGCGAGAGCACAATTTGCAAAACATCACGGCCCGCTTCCCGTTAGGAAAATTTATAGCCGTGACG
GGAGTTTCCGGTTCTGGGAAATCCACCTTGGTTAATTCCATTTTGAAAAAAGCAATCGCTCAAAAACTCAATCGTAATTC
AGACAAACCGGGTAAATTCAAAAATATTTCAGGAATTGAGCATATTGATCGTTTGATTGATATTGACCAGAGCCCGATCG
GCCGAACACCAAGATCCAATCCAGCGACGTATACTGGCGTCTTTGATGATATTCGCGATCTCTTTGCTAAGACCAACGAA
GCTAAGATTCGTGGGTATAAAAAGGGGCGTTTCTCTTTCAATGTGAAGGGGGGACGCTGCGAGGCCTGCTCTGGGGATGG
GATTATCAAGATTGAGATGCACTTTTTACCAGATGTTTATGTCCCTTGTGAGGTTTGCCATGGAACACGGTACAATAGTG
AAACCTTGGAAGTGCACTACAAAGAGAAAAACATTGCTCAAGTTTTGGATATGACGGTCAATGATGCAGTGGAATTTTTT
AAGCATATTCCTAAAATTGAGCGGAAACTTCAGACCATCAAAGACGTAGGACTAGGATATGTAACATTAGGACAACCTGC
CACAACTCTTTCTGGTGGTGAGGCTCAGCGGATGAAACTAGCCAGCGAACTTCACAAGCGCTCAACAGGTAAGTCTTTCT
ATATTCTGGATGAACCAACTACAGGTCTGCACACGGAGGATATTGCGAAACTTCTCCAAGTGCTATCACGTTTTGTAGAC
GATGGCAATACGGTTCTCGTCATCGAACATAATTTGGACGTTATTAAGACGGCCGATCACATTATTGATCTTGGACCAGA
AGGTGGTATTGGTGGAGGTACTATTATTGCTACTGGTACACCAGAAGAAGTAGCTGCAAACTCTGCTAGCTATACTGGCC
AGTATCTAAAAGGAAAGTTAAAATAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (288-396)

• UvrA interaction domain (UvrA_inter) (132-238)

• ABC transporter (ABC_tran) (624-860)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	89.681	99.894	0.896
uvrA	Streptococcus pneumoniae TIGR4	89.681	99.894	0.896
uvrA	Streptococcus pneumoniae D39	89.681	99.894	0.896