Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   G8D99_RS07125 Genome accession   NZ_CP049916
Coordinates   1541630..1542673 (-) Length   347 a.a.
NCBI ID   WP_166323915.1    Uniprot ID   A0A6G8S3T4
Organism   Acinetobacter lanii strain 185     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1536630..1547673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G8D99_RS07095 (G8D99_07095) lpxD 1536863..1537933 (+) 1071 WP_166323906.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  G8D99_RS07100 (G8D99_07100) fabZ 1537936..1538421 (+) 486 WP_166323908.1 3-hydroxyacyl-ACP dehydratase FabZ -
  G8D99_RS07105 (G8D99_07105) lpxA 1538418..1539206 (+) 789 WP_166323910.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  G8D99_RS07110 (G8D99_07110) - 1539301..1540143 (-) 843 WP_166323912.1 YbgF trimerization domain-containing protein -
  G8D99_RS07120 (G8D99_07120) - 1540849..1541550 (-) 702 WP_166323913.1 regulatory protein RecX -
  G8D99_RS07125 (G8D99_07125) recA 1541630..1542673 (-) 1044 WP_166323915.1 recombinase RecA Machinery gene
  G8D99_RS07130 (G8D99_07130) - 1542821..1543261 (-) 441 WP_166323917.1 RNA-binding S4 domain-containing protein -
  G8D99_RS07135 (G8D99_07135) - 1543245..1543946 (-) 702 WP_166323919.1 HAD-IA family hydrolase -
  G8D99_RS07140 (G8D99_07140) - 1543964..1544815 (+) 852 WP_166323921.1 3'(2'),5'-bisphosphate nucleotidase CysQ -
  G8D99_RS07145 (G8D99_07145) - 1544876..1545613 (+) 738 WP_166323923.1 histidine phosphatase family protein -
  G8D99_RS07150 (G8D99_07150) - 1545711..1547003 (-) 1293 WP_166323925.1 MFS transporter -
  G8D99_RS07155 (G8D99_07155) rpsT 1547236..1547502 (-) 267 WP_039622003.1 30S ribosomal protein S20 -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 37632.20 Da        Isoelectric Point: 5.3037

>NTDB_id=428639 G8D99_RS07125 WP_166323915.1 1541630..1542673(-) (recA) [Acinetobacter lanii strain 185]
MDENKSKALNAALSQIEKQFGKNSVMRLGDNTVQAVEAVSTGSLMLDIALGIGGLPKGRICEIYGPESSGKTTMTLQAIA
ECQKGGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAVDMIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TRVKVVKNKMAPPFREAIFQILYGKGVNHLGELVDLAVSQELVQKAGAWYSYQGSKIGQGKNNVIRHLEEHPELAKDLER
MIREQLLVTANPAPADEKDEEVDLLDV

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=428639 G8D99_RS07125 WP_166323915.1 1541630..1542673(-) (recA) [Acinetobacter lanii strain 185]
ATGGATGAGAACAAAAGCAAAGCACTGAATGCTGCATTAAGCCAAATTGAAAAACAATTTGGTAAAAATTCAGTGATGCG
TTTAGGTGACAACACGGTACAAGCGGTTGAAGCCGTATCAACTGGCTCTTTAATGCTTGATATAGCACTCGGTATAGGTG
GCCTACCTAAAGGTCGTATCTGTGAAATTTATGGTCCTGAATCTTCAGGTAAAACCACAATGACACTACAAGCGATTGCT
GAATGTCAAAAAGGCGGGGGGACTTGTGCCTTTATCGATGCTGAACATGCTTTAGATCCTCAATATGCACGCAAATTGGG
TGTAGATATTGACAATCTTTTGGTGTCTCAACCTGACCATGGTGAACAAGCCCTCGAAATTGCGGACATGCTGGTACGTT
CAGGTGCTGTGGACATGATCGTGGTCGATTCCGTGGCAGCACTAACCCCAAAAGCCGAAATTGAAGGCGAAATGGGTGAC
TCACACATGGGTCTACAAGCCCGTTTGATGAGCCAAGCTTTACGTAAAATCACCGGTAATGCAAAACGCTCAAACTGTAT
GGTGATCTTCATTAACCAAATCCGTATGAAGATTGGTGTAATGTTTGGTAGCCCAGAAACCACAACCGGTGGTAATGCAC
TCAAATTCTACGCTTCTGTACGTCTGGATATCCGCCGTATCGGTCAAGTCAAAGAAGGTGATGAAATCGTCGGTTCTGAA
ACACGGGTTAAAGTTGTGAAGAACAAAATGGCACCTCCATTCCGCGAAGCGATTTTCCAAATTCTTTACGGTAAAGGCGT
AAATCATTTAGGCGAATTGGTTGACCTCGCTGTTTCTCAAGAATTGGTGCAAAAAGCAGGTGCTTGGTACTCATACCAAG
GCAGCAAAATTGGTCAAGGTAAAAACAACGTGATCCGTCACTTGGAAGAACACCCTGAATTGGCCAAAGACCTTGAACGC
ATGATTCGCGAACAGTTATTGGTGACTGCAAATCCAGCACCTGCTGACGAAAAAGATGAAGAAGTTGATTTACTTGATGT
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6G8S3T4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

89.08

100

0.893

  recA Acinetobacter baumannii D1279779

89.306

99.712

0.89

  recA Pseudomonas stutzeri DSM 10701

74.063

100

0.741

  recA Vibrio cholerae strain A1552

74.32

95.389

0.709

  recA Vibrio cholerae O1 biovar El Tor strain E7946

74.32

95.389

0.709

  recA Glaesserella parasuis strain SC1401

69.565

99.424

0.692

  recA Ralstonia pseudosolanacearum GMI1000

71.646

94.524

0.677

  recA Neisseria gonorrhoeae MS11

67.593

93.372

0.631

  recA Neisseria gonorrhoeae MS11

67.593

93.372

0.631

  recA Neisseria gonorrhoeae strain FA1090

67.593

93.372

0.631

  recA Helicobacter pylori strain NCTC11637

61.159

99.424

0.608

  recA Helicobacter pylori 26695

60.87

99.424

0.605

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.142

95.389

0.602

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.691

94.236

0.591

  recA Bacillus subtilis subsp. subtilis str. 168

62.539

93.084

0.582

  recA Streptococcus mitis SK321

58.092

99.712

0.579

  recA Streptococcus mitis NCTC 12261

58.651

98.271

0.576

  recA Streptococcus mutans UA159

60.671

94.524

0.573

  recA Streptococcus pneumoniae R6

60.736

93.948

0.571

  recA Streptococcus pneumoniae TIGR4

60.736

93.948

0.571

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.736

93.948

0.571

  recA Streptococcus pneumoniae Rx1

60.736

93.948

0.571

  recA Streptococcus pneumoniae D39

60.736

93.948

0.571

  recA Streptococcus pyogenes NZ131

60.308

93.66

0.565

  recA Latilactobacillus sakei subsp. sakei 23K

56.358

99.712

0.562

  recA Lactococcus lactis subsp. cremoris KW2

57.895

93.084

0.539