Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   G7083_RS03760 Genome accession   NZ_CP049913
Coordinates   805974..807035 (-) Length   353 a.a.
NCBI ID   WP_166013648.1    Uniprot ID   A0A6G8D2G7
Organism   Vibrio sp. HDW18     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 800974..812035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G7083_RS03745 (G7083_03745) - 801214..802401 (-) 1188 WP_166013645.1 aspartate kinase -
  G7083_RS03750 (G7083_03750) alaS 802606..805188 (-) 2583 WP_166013646.1 alanine--tRNA ligase -
  G7083_RS03755 (G7083_03755) recX 805401..805859 (-) 459 WP_166013647.1 recombination regulator RecX -
  G7083_RS03760 (G7083_03760) recA 805974..807035 (-) 1062 WP_166013648.1 recombinase RecA Machinery gene
  G7083_RS03765 (G7083_03765) - 807166..807672 (-) 507 WP_166013649.1 nicotinamide-nucleotide amidohydrolase family protein -
  G7083_RS03770 (G7083_03770) - 807787..808917 (-) 1131 WP_166013650.1 sulfate/molybdate ABC transporter ATP-binding protein -
  G7083_RS03775 (G7083_03775) cysW 808914..809777 (-) 864 WP_166013651.1 sulfate ABC transporter permease subunit CysW -
  G7083_RS03780 (G7083_03780) cysT 809789..810637 (-) 849 WP_166013652.1 sulfate/thiosulfate ABC transporter permease CysT -
  G7083_RS03785 (G7083_03785) cysP 810705..811706 (-) 1002 WP_166013653.1 thiosulfate ABC transporter substrate-binding protein CysP -

Sequence

Protein


Download         Length: 353 a.a.        Molecular weight: 38034.60 Da        Isoelectric Point: 5.0688

>NTDB_id=428589 G7083_RS03760 WP_166013648.1 805974..807035(-) (recA) [Vibrio sp. HDW18]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRTMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIA
AAQRESKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKEAHTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSCNGDKIGQGKANACKYLKENPAIASALDK
KLRDMLLNPENMQLTEETSAAVDEAEFGAAEEF

Nucleotide


Download         Length: 1062 bp        

>NTDB_id=428589 G7083_RS03760 WP_166013648.1 805974..807035(-) (recA) [Vibrio sp. HDW18]
ATGGACGAGAATAAACAAAAGGCACTTGCGGCCGCCCTTGGTCAAATTGAAAAACAATTTGGTAAAGGTTCCATCATGCG
TTTAGGTGATAACCGCACGATGGATGTAGAAACCATATCGACCGGCTCATTGTCTCTGGATATCGCCTTAGGTGCGGGTG
GTTTGCCGATGGGACGTATTGTTGAGATTTTCGGCCCAGAATCTTCGGGTAAAACCACACTGACCTTGGAACTGATTGCT
GCGGCCCAACGCGAAAGCAAAACCTGTGCTTTTATCGATGCTGAGCACGCTTTGGATCCGGTATATGCCAAAAAGCTGGG
CGTTAATATTGATGAGTTACTGGTTTCTCAGCCAGATACTGGCGAGCAAGCGCTAGAGATTTGTGATGCCTTAGCTCGCT
CTGGTGCGGTGGATGTGATTGTGGTCGACTCTGTCGCAGCCTTGACACCAAAAGCGGAAATTGAAGGAGAGATGGGCGAC
AGCCACATGGGTCTGCAAGCGCGAATGCTGTCACAAGCGATGCGTAAGCTAACCGGTAACCTCAAGCAGTCCAACTGTAT
GTGCATCTTTATCAACCAGATTCGGATGAAGATCGGGGTAATGTTTGGCAACCCAGAAACCACCACCGGTGGTAACGCGT
TGAAATTTTACGCTTCGGTTCGTTTAGATATTCGTCGTACTGGTGCCATCAAAGAAGGTGATGAAGTCGTCGGTAACGAA
ACTCGGATCAAAGTGGTGAAGAATAAAATTGCGGCACCTTTTAAAGAAGCCCATACGCAAATCATGTATGGCCAAGGTTT
TAACCGCGAAGGTGAATTAATTGATCTTGGTGTTAAGCATAAAATGGTTGAAAAATCAGGCGCTTGGTATAGCTGTAATG
GTGATAAAATTGGCCAAGGTAAAGCGAACGCTTGTAAATATCTGAAAGAGAATCCAGCGATTGCTAGTGCGCTAGACAAA
AAGCTGCGTGATATGCTGCTAAACCCAGAAAATATGCAATTGACCGAGGAAACCTCTGCGGCAGTTGATGAGGCAGAATT
TGGTGCTGCCGAAGAGTTTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6G8D2G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Vibrio cholerae strain A1552

95.198

100

0.955
  recA Vibrio cholerae O1 biovar El Tor strain E7946

95.198

100

0.955
  recA Pseudomonas stutzeri DSM 10701

75.229

92.635

0.697
  recA Glaesserella parasuis strain SC1401

69.516

99.433

0.691
  recA Acinetobacter baylyi ADP1

70.52

98.017

0.691
  recA Acinetobacter baumannii D1279779

73.089

92.635

0.677
  recA Neisseria gonorrhoeae MS11

67.151

97.45

0.654
  recA Neisseria gonorrhoeae MS11

67.151

97.45

0.654
  recA Neisseria gonorrhoeae strain FA1090

67.151

97.45

0.654
  recA Ralstonia pseudosolanacearum GMI1000

70.418

88.102

0.62
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.691

92.635

0.581
  recA Helicobacter pylori strain NCTC11637

60.177

96.034

0.578
  recA Helicobacter pylori 26695

59.882

96.034

0.575
  recA Bacillus subtilis subsp. subtilis str. 168

62.928

90.935

0.572
  recA Streptococcus pneumoniae Rx1

62.229

91.501

0.569
  recA Streptococcus pneumoniae TIGR4

62.229

91.501

0.569
  recA Streptococcus pneumoniae R6

62.229

91.501

0.569
  recA Streptococcus pneumoniae D39

62.229

91.501

0.569
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.241

94.051

0.567
  recA Streptococcus mitis NCTC 12261

61.61

91.501

0.564
  recA Streptococcus mitis SK321

61.3

91.501

0.561
  recA Streptococcus mutans UA159

60.615

92.068

0.558
  recA Streptococcus pyogenes NZ131

60.308

92.068

0.555
  recA Lactococcus lactis subsp. cremoris KW2

60.372

91.501

0.552
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

59.509

92.351

0.55
  recA Latilactobacillus sakei subsp. sakei 23K

60.125

90.935

0.547