Detailed information NTG0042386

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: XACM_RS08675
• Genome accession: NC_016010
• Coordinates: 1971549..1972583 (+)
• Length: 344 a.a.
• NCBI ID: WP_008574635.1
• Uniprot ID: A0A3Q9Q2C2
• Organism: Xanthomonas euvesicatoria pv. citrumelo F1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1966549..1977583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XACM_RS08660 (XACM_1758)	-	1968013..1968507 (+)	495	WP_008574640.1	CinA family protein	-
XACM_RS08665 (XACM_1759)	ubiB	1968973..1970649 (+)	1677	WP_008574639.1	2-polyprenylphenol 6-hydroxylase	-
XACM_RS08670 (XACM_1760)	lexA	1970735..1971376 (+)	642	WP_014089981.1	transcriptional repressor LexA	-
XACM_RS08675 (XACM_1761)	recA	1971549..1972583 (+)	1035	WP_008574635.1	recombinase RecA	Machinery gene
XACM_RS08680 (XACM_1762)	-	1972601..1972864 (-)	264	WP_014089982.1	hypothetical protein	-
XACM_RS08685 (XACM_1763)	recX	1972881..1973369 (+)	489	WP_014089983.1	recombination regulator RecX	-
XACM_RS08690 (XACM_1764)	alaS	1973471..1976119 (+)	2649	WP_014089984.1	alanine--tRNA ligase	-
XACM_RS08695 (XACM_1765)	csrA	1976259..1976471 (+)	213	WP_003481884.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37175.68 Da
• Isoelectric Point: 5.0698

>NTDB_id=42386 XACM_RS08675 WP_008574635.1 1971549..1972583(+) (recA) [Xanthomonas euvesicatoria pv. citrumelo F1]
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
QCQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARTYLRDNPQVATRL
EAELREKFQPAEAPREAGDDEDKE

Nucleotide

• Length: 1035 bp

>NTDB_id=42386 XACM_RS08675 WP_008574635.1 1971549..1972583(+) (recA) [Xanthomonas euvesicatoria pv. citrumelo F1]
ATGGACGAGAACAAGAAGCGCGCCCTTTCCGCCGCACTGAGCCAGATCGAAAAGCAATTCGGCAAGGGTTCGGTCATGCG
CATGGGCGACCGCGTCATCGAGGCGGTCGAAGTCATCCCGACCGGCTCGTTGATGCTGGATATCGCCCTGGGGATCGGCG
GCCTGCCGAAGGGCCGCGTGGTCGAAATCTACGGCCCGGAATCCTCCGGCAAGACCACCTTGACCCTGCAAGCCATCGCC
CAGTGCCAGAAGAACGGCGGCACCGCTGCCTTCATCGACGCCGAGCACGCGCTGGACCCGATTTATGCGGCCAAGCTGGG
CGTCAACGTCGACGACCTGCTGCTGTCGCAGCCCGATACCGGTGAGCAGGCACTGGAAATTGCCGACATGCTGGTGCGCT
CGGGTTCGGTTGATATCGTGGTGGTCGACTCGGTTGCCGCACTGACGCCAAAGGCGGAAATCGAAGGCGAGATGGGCGAC
CAGTTGCCTGGTTTGCAGGCTCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGGCAATATCAAGCGCTCCAACACGCT
GGTGGTCTTCATCAATCAGCTGCGCATGAAGATCGGCGTCATGATGCCGGGCCAGAGCCCGGAAGTGACCACCGGCGGCA
ACGCGCTGAAGTTCTACGCCTCGGTGCGTCTGGATATCCGCCGTATCGGTGCGATCAAGAAGGGCGACGAGATCATCGGC
AACCAGACCAAGATCAAGGTGGTCAAGAACAAGCTGGCGCCTCCGTTCAAGCAGGTCGTGACCGAAATCCTGTATGGCGA
AGGCATCAGCCGCGAGGGCGAATTGATCGACATGGGCGTGGAAGCCAAGCTGGTCGACAAGGCCGGCGCCTGGTACAGCT
ACGGCGATGAGCGCATCGGGCAGGGCAAGGACAACGCGCGGACCTACCTGCGCGACAACCCGCAGGTTGCGACCCGGCTG
GAAGCCGAGTTGCGTGAGAAGTTCCAGCCTGCCGAAGCACCGCGCGAGGCCGGCGACGACGAAGACAAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: A0A3Q9Q2C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	70.93	100	0.709
recA	Pseudomonas stutzeri DSM 10701	70.623	97.965	0.692
recA	Acinetobacter baumannii D1279779	72.256	95.349	0.689
recA	Ralstonia pseudosolanacearum GMI1000	75.08	90.988	0.683
recA	Vibrio cholerae strain A1552	70.859	94.767	0.672
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.859	94.767	0.672
recA	Neisseria gonorrhoeae MS11	69.325	94.767	0.657
recA	Neisseria gonorrhoeae MS11	69.325	94.767	0.657
recA	Neisseria gonorrhoeae strain FA1090	69.325	94.767	0.657
recA	Glaesserella parasuis strain SC1401	65.407	100	0.654
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.174	97.093	0.613
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.047	100	0.61
recA	Latilactobacillus sakei subsp. sakei 23K	61.976	97.093	0.602
recA	Helicobacter pylori strain NCTC11637	61.747	96.512	0.596
recA	Helicobacter pylori 26695	61.446	96.512	0.593
recA	Bacillus subtilis subsp. subtilis str. 168	62.462	94.477	0.59
recA	Streptococcus pneumoniae D39	61.585	95.349	0.587
recA	Streptococcus mitis SK321	61.585	95.349	0.587
recA	Streptococcus pneumoniae Rx1	61.585	95.349	0.587
recA	Streptococcus pneumoniae R6	61.585	95.349	0.587
recA	Streptococcus pneumoniae TIGR4	61.585	95.349	0.587
recA	Streptococcus pyogenes NZ131	60.909	95.93	0.584
recA	Streptococcus mitis NCTC 12261	61.28	95.349	0.584
recA	Streptococcus mutans UA159	60.606	95.93	0.581
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.788	95.93	0.564
recA	Lactococcus lactis subsp. cremoris KW2	59.385	94.477	0.561