Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   ENTAS_RS17230 Genome accession   NC_015968
Coordinates   3662662..3663720 (-) Length   352 a.a.
NCBI ID   WP_014071490.1    Uniprot ID   -
Organism   Enterobacter soli     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3657662..3668720
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ENTAS_RS17215 (Entas_3403) csrA 3658907..3659092 (-) 186 WP_000906486.1 carbon storage regulator CsrA -
  ENTAS_RS17220 (Entas_3404) alaS 3659334..3661961 (-) 2628 WP_014071488.1 alanine--tRNA ligase -
  ENTAS_RS17225 (Entas_3405) recX 3662093..3662593 (-) 501 WP_014071489.1 recombination regulator RecX -
  ENTAS_RS17230 (Entas_3406) recA 3662662..3663720 (-) 1059 WP_014071490.1 recombinase RecA Machinery gene
  ENTAS_RS17235 (Entas_3407) pncC 3663812..3664309 (-) 498 WP_014071491.1 nicotinamide-nucleotide amidase -
  ENTAS_RS17240 (Entas_3408) - 3664440..3665318 (-) 879 WP_014071492.1 metal ABC transporter substrate-binding protein -
  ENTAS_RS17245 (Entas_3409) - 3665333..3666193 (-) 861 WP_014071493.1 metal ABC transporter permease -
  ENTAS_RS17250 (Entas_3410) - 3666190..3666843 (-) 654 WP_014071494.1 ATP-binding cassette domain-containing protein -
  ENTAS_RS17255 (Entas_3411) mltB 3667112..3668212 (-) 1101 WP_168162138.1 lytic murein transglycosylase B -

Sequence

Protein


Download         Length: 352 a.a.        Molecular weight: 37811.19 Da        Isoelectric Point: 4.7417

>NTDB_id=42273 ENTAS_RS17230 WP_014071490.1 3662662..3663720(-) (recA) [Enterobacter soli]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFFGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKDNPAAAKEI
EKKVRELLLNNQDSTPDFAVDGADVEETNEDF

Nucleotide


Download         Length: 1059 bp        

>NTDB_id=42273 ENTAS_RS17230 WP_014071490.1 3662662..3663720(-) (recA) [Enterobacter soli]
ATGGCTATCGACGAGAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGACGTGGAAACTATCTCCACCGGTTCGCTTTCTCTGGATATCGCACTGGGCG
CTGGCGGTTTGCCAATGGGCCGTATCGTAGAAATCTACGGGCCAGAATCCTCCGGTAAAACGACCCTGACCTTACAGGTT
ATTGCAGCTGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
GCTGGGTGTTGATATCGACAACCTGCTGTGTTCTCAGCCAGACACAGGTGAGCAGGCGCTGGAAATTTGCGACGCGCTGG
CTCGTTCCGGTGCTGTTGACGTTATCGTGGTCGATTCCGTTGCTGCATTGACGCCAAAAGCGGAAATCGAAGGCGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCAATGCGTAAGCTGGCAGGTAACCTGAAGCAATCCAA
CACGCTGCTTATCTTCATCAACCAGATCCGTATGAAAATTGGTGTGATGTTCGGTAACCCGGAAACCACCACCGGTGGTA
ACGCGCTGAAATTCTACGCCTCTGTCCGTCTTGATATCCGTCGTATCGGCGCGGTGAAAGAGGGCGAGAACGTGGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCTGCACCGTTCAAACAAGCTGAATTCCAGATCCTCTATGGTGA
AGGTATCAACTTCTTCGGCGAACTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCCTGGTACAGCT
ACAACGGCGACAAGATTGGTCAGGGTAAAGCGAATGCAATCTCCTGGCTGAAAGATAACCCGGCTGCGGCGAAAGAAATT
GAGAAGAAAGTTCGTGAGCTGCTGCTGAATAACCAGGATTCAACGCCTGATTTCGCGGTTGATGGCGCGGACGTTGAAGA
AACTAACGAAGACTTTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(9-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Vibrio cholerae strain A1552

84.894

94.034

0.798
  recA Vibrio cholerae O1 biovar El Tor strain E7946

84.894

94.034

0.798
  recA Pseudomonas stutzeri DSM 10701

72.622

98.58

0.716
  recA Acinetobacter baumannii D1279779

74.618

92.898

0.693
  recA Acinetobacter baylyi ADP1

74.085

93.182

0.69
  recA Glaesserella parasuis strain SC1401

68.946

99.716

0.688
  recA Ralstonia pseudosolanacearum GMI1000

68.263

94.886

0.648
  recA Neisseria gonorrhoeae MS11

69.325

92.614

0.642
  recA Neisseria gonorrhoeae MS11

69.325

92.614

0.642
  recA Neisseria gonorrhoeae strain FA1090

69.325

92.614

0.642
  recA Helicobacter pylori strain NCTC11637

61.424

95.739

0.588
  recA Helicobacter pylori 26695

61.128

95.739

0.585
  recA Streptococcus pneumoniae TIGR4

62.539

91.761

0.574
  recA Streptococcus mitis SK321

62.539

91.761

0.574
  recA Streptococcus mitis NCTC 12261

62.539

91.761

0.574
  recA Streptococcus pneumoniae Rx1

62.539

91.761

0.574
  recA Streptococcus pneumoniae D39

62.539

91.761

0.574
  recA Streptococcus pneumoniae R6

62.539

91.761

0.574
  recA Streptococcus pyogenes NZ131

62.154

92.33

0.574
  recA Streptococcus mutans UA159

61.846

92.33

0.571
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.36

94.602

0.571
  recA Bacillus subtilis subsp. subtilis str. 168

62.305

91.193

0.568
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

61.728

92.045

0.568
  recA Latilactobacillus sakei subsp. sakei 23K

61.231

92.33

0.565
  recA Lactococcus lactis subsp. cremoris KW2

61.61

91.761

0.565
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.748

91.193

0.554

Multiple sequence alignment