Detailed information NTG0421670

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: G3M69_RS03945
• Genome accession: NZ_CP048599
• Coordinates: 812120..813163 (+)
• Length: 347 a.a.
• NCBI ID: WP_039091763.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain GCT 97
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 807120..818163

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3M69_RS03910 (G3M69_03910)	-	807712..807930 (+)	219	WP_001864632.1	cytochrome c oxidase, cbb3-type, CcoQ subunit	-
G3M69_RS03915 (G3M69_03915)	ccoP	807932..808810 (+)	879	WP_097688155.1	cytochrome-c oxidase, cbb3-type subunit III	-
G3M69_RS03920 (G3M69_03920)	-	808821..809027 (+)	207	WP_078263979.1	DUF4006 family protein	-
G3M69_RS03925 (G3M69_03925)	-	809128..809712 (+)	585	WP_163563042.1	hypothetical protein	-
G3M69_RS03930 (G3M69_03930)	-	809725..810306 (+)	582	WP_079353115.1	hypothetical protein	-
G3M69_RS03935 (G3M69_03935)	-	810394..811161 (+)	768	WP_163563043.1	hypothetical protein	-
G3M69_RS03940 (G3M69_03940)	-	811158..812021 (-)	864	WP_163563044.1	menaquinone biosynthesis family protein	-
G3M69_RS03945 (G3M69_03945)	recA	812120..813163 (+)	1044	WP_039091763.1	recombinase RecA	Machinery gene
G3M69_RS03950 (G3M69_03950)	eno	813175..814455 (+)	1281	WP_163563045.1	phosphopyruvate hydratase	-
G3M69_RS03955 (G3M69_03955)	-	814448..814723 (+)	276	WP_163563046.1	hypothetical protein	-
G3M69_RS03960 (G3M69_03960)	-	814740..815336 (+)	597	WP_205424864.1	AMIN domain-containing protein	-
G3M69_RS03965 (G3M69_03965)	-	815341..815829 (+)	489	WP_078272226.1	shikimate kinase	-
G3M69_RS03970 (G3M69_03970)	-	815851..816807 (+)	957	WP_000952270.1	PDC sensor domain-containing protein	-
G3M69_RS03975 (G3M69_03975)	-	816812..817909 (-)	1098	WP_163563048.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37638.33 Da
• Isoelectric Point: 5.5216

>NTDB_id=421670 G3M69_RS03945 WP_039091763.1 812120..813163(+) (recA) [Helicobacter pylori strain GCT 97]
MAIDEDKQKAISLAIKQIDKVFGKGALVRLGDKQVEKIDAISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHI
IAECQKNGGVCAFIDAEHALDVYYAKRLGVDTENLLVSQPSTGEEALEILETITRSGGIDLVVVDSVAALTPKAEIDGDM
GDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMTGYGSPETTTGGNALKFYASVRIDIRRIASLKQNEQHI
GNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANE
ITLKIKESIGSNEEIMPLPDEPLEEME

Nucleotide

• Length: 1044 bp

>NTDB_id=421670 G3M69_RS03945 WP_039091763.1 812120..813163(+) (recA) [Helicobacter pylori strain GCT 97]
ATGGCAATAGATGAAGACAAACAAAAAGCGATTTCTTTAGCGATCAAACAAATTGATAAGGTTTTTGGTAAGGGGGCGTT
GGTGCGCCTTGGGGATAAGCAAGTAGAAAAGATTGACGCTATTTCTACAGGCTCGTTAGGATTGGATTTAGCTTTAGGGA
TTGGGGGCGTTCCAAAGGGTAGGATTATTGAAATTTATGGGCCAGAGTCAAGCGGGAAGACCACTCTAAGCTTGCATATT
ATTGCAGAATGCCAAAAAAATGGCGGCGTGTGCGCGTTCATTGACGCTGAGCATGCCTTAGACGTGTATTATGCCAAGAG
GTTAGGCGTGGATACGGAAAATTTACTCGTTTCCCAACCAAGCACGGGCGAAGAAGCTTTAGAGATTTTAGAAACGATCA
CTAGGAGCGGAGGGATTGATTTAGTGGTGGTGGATTCGGTGGCGGCCCTTACGCCTAAAGCAGAGATTGATGGGGATATG
GGCGATCAGCATGTGGGCTTGCAAGCAAGGCTTATGAGCCATGCGTTAAGAAAAATCACCGGTGTCTTGCACAAAATGAA
CACTACTCTCATTTTTATCAATCAAATCAGGATGAAGATTGGCATGACGGGTTATGGGAGTCCAGAGACCACAACCGGAG
GTAACGCTTTAAAATTCTATGCGAGCGTTAGGATTGATATTAGAAGAATCGCCTCCCTCAAGCAAAATGAACAGCATATT
GGTAACAGGGCTAAAGCCAAAGTCGTTAAAAATAAAGTCGCTCCGCCCTTTAGAGAAGCGGAATTTGACATCATGTTTGG
GGAAGGGATTTCTAAAGAGGGCGAAATCATTGATTACGGCGTGAAATTAGACATTGTGGATAAGAGCGGGGCATGGCTTA
GTTATCAGGATAAAAAGCTAGGGCAAGGCCGAGAAAACGCTAAAGCCTTATTGAAAGAAGATAAAGCCCTAGCGAATGAA
ATCACTCTTAAGATTAAAGAGAGTATCGGCTCTAATGAAGAGATCATGCCCTTACCCGATGAGCCTTTAGAAGAAATGGA
ATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Helicobacter pylori strain NCTC11637	98.271	100	0.983
recA	Helicobacter pylori 26695	98.271	100	0.983
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	77.744	94.524	0.735
recA	Neisseria gonorrhoeae MS11	65.846	93.66	0.617
recA	Neisseria gonorrhoeae MS11	65.846	93.66	0.617
recA	Neisseria gonorrhoeae strain FA1090	65.846	93.66	0.617
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.253	95.677	0.605
recA	Bacillus subtilis subsp. subtilis str. 168	64.308	93.66	0.602
recA	Acinetobacter baumannii D1279779	63.303	94.236	0.597
recA	Ralstonia pseudosolanacearum GMI1000	61.31	96.83	0.594
recA	Acinetobacter baylyi ADP1	62.997	94.236	0.594
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.119	96.83	0.582
recA	Vibrio cholerae strain A1552	60.119	96.83	0.582
recA	Pseudomonas stutzeri DSM 10701	59.064	98.559	0.582
recA	Glaesserella parasuis strain SC1401	59.451	94.524	0.562
recA	Streptococcus pneumoniae Rx1	54.986	100	0.556
recA	Streptococcus pneumoniae D39	54.986	100	0.556
recA	Streptococcus pneumoniae R6	54.986	100	0.556
recA	Streptococcus pneumoniae TIGR4	54.986	100	0.556
recA	Latilactobacillus sakei subsp. sakei 23K	53.782	100	0.553
recA	Streptococcus pyogenes NZ131	56.667	95.101	0.539
recA	Lactococcus lactis subsp. cremoris KW2	56.839	94.813	0.539
recA	Streptococcus mitis SK321	56.535	94.813	0.536
recA	Streptococcus mitis NCTC 12261	56.535	94.813	0.536
recA	Streptococcus mutans UA159	55.09	96.254	0.53
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.521	93.948	0.522