Detailed information NTG0042162

Bioinformatically predicted

Overview

• Name: pilA/pilAI
• Type: Machinery gene
• Locus tag: BURJV3_RS16230
• Genome accession: NC_015947
• Coordinates: 3545258..3545671 (-)
• Length: 137 a.a.
• NCBI ID: WP_014038265.1
• Uniprot ID: -
• Organism: Stenotrophomonas maltophilia JV3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3540258..3550671

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BURJV3_RS16220 (BurJV3_3200)	pilR	3541146..3542519 (+)	1374	WP_014038262.1	sigma-54 dependent transcriptional regulator	Regulator
BURJV3_RS16225 (BurJV3_3201)	pilB	3542792..3544522 (-)	1731	WP_014038263.1	type IV-A pilus assembly ATPase PilB	Machinery gene
BURJV3_RS20975 (BurJV3_3202)	-	3544747..3545154 (-)	408	WP_014038264.1	pilin	-
BURJV3_RS16230 (BurJV3_3203)	pilA/pilAI	3545258..3545671 (-)	414	WP_014038265.1	pilin	Machinery gene
BURJV3_RS16235 (BurJV3_3204)	pilC	3546028..3547287 (+)	1260	WP_014038266.1	type II secretion system F family protein	Machinery gene
BURJV3_RS16240 (BurJV3_3205)	-	3547295..3548158 (+)	864	WP_005418626.1	A24 family peptidase	-
BURJV3_RS16245 (BurJV3_3206)	coaE	3548170..3548781 (+)	612	WP_014038267.1	dephospho-CoA kinase	-
BURJV3_RS16250 (BurJV3_3207)	-	3548874..3549587 (-)	714	WP_014038268.1	hypothetical protein	-

Sequence

Protein

• Length: 137 a.a.
• Molecular weight: 14273.68 Da
• Isoelectric Point: 8.4848

>NTDB_id=42162 BURJV3_RS16230 WP_014038265.1 3545258..3545671(-) (pilA/pilAI) [Stenotrophomonas maltophilia JV3]
MKNQKGFTLIELMIVVAIIAILAAIALPMYQDYVAKSQATAGLAEITPGKTQFEVAINEGKTSADIKDIAAIGLKSSDRC
TITMTFAETGNIVCTLKGSPKLTASKGAITLTRATDGTWACTSGVDAKYLPSGCKAP

Nucleotide

• Length: 414 bp

>NTDB_id=42162 BURJV3_RS16230 WP_014038265.1 3545258..3545671(-) (pilA/pilAI) [Stenotrophomonas maltophilia JV3]
ATGAAGAACCAGAAGGGCTTCACCCTTATCGAACTGATGATCGTCGTTGCGATCATCGCCATCCTGGCCGCTATCGCCCT
GCCGATGTACCAGGACTACGTGGCCAAGTCGCAGGCCACTGCCGGCCTGGCCGAAATCACCCCGGGCAAGACTCAGTTTG
AAGTCGCCATCAACGAGGGCAAGACCTCGGCTGATATCAAGGACATTGCTGCCATCGGTCTGAAGAGCTCCGATCGTTGC
ACCATCACCATGACTTTCGCTGAGACCGGCAACATTGTCTGCACGCTGAAGGGCAGCCCGAAGCTGACTGCTTCGAAGGG
CGCAATTACCCTGACCCGCGCTACCGACGGCACCTGGGCCTGCACTTCGGGCGTTGATGCCAAGTATCTGCCGAGCGGTT
GCAAGGCTCCGTAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (35-135)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA/pilAI	Pseudomonas stutzeri DSM 10701	57.143	97.08	0.555
pilA	Acinetobacter baumannii strain A118	52.857	100	0.54
pilA	Pseudomonas aeruginosa PAK	43.671	100	0.504
pilA/pilAII	Pseudomonas stutzeri DSM 10701	51.128	97.08	0.496
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	42.069	100	0.445
pilA	Vibrio cholerae strain A1552	42.069	100	0.445
pilA	Vibrio cholerae C6706	42.069	100	0.445
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	31.551	100	0.431
comP	Acinetobacter baylyi ADP1	39.333	100	0.431
pilA	Acinetobacter nosocomialis M2	41.429	100	0.423
pilA2	Legionella pneumophila str. Paris	39.726	100	0.423
pilE	Neisseria gonorrhoeae MS11	37.179	100	0.423
pilA/pilA1	Eikenella corrodens VA1	36.306	100	0.416
pilA2	Legionella pneumophila strain ERS1305867	39.041	100	0.416
pilA	Vibrio parahaemolyticus RIMD 2210633	40.152	96.35	0.387
pilA	Ralstonia pseudosolanacearum GMI1000	32.317	100	0.387
pilE	Neisseria gonorrhoeae strain FA1090	32.484	100	0.372
pilA	Haemophilus influenzae 86-028NP	37.037	98.54	0.365