Detailed information NTG0419932

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GSF71_RS07895
• Genome accession: NZ_CP048116
• Coordinates: 1588012..1589079 (+)
• Length: 355 a.a.
• NCBI ID: WP_011374196.1
• Uniprot ID: A0A094Y0D2
• Organism: Latilactobacillus sakei strain MBEL1397
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1583012..1594079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSF71_RS07875	yfmH	1584179..1585483 (+)	1305	WP_025016333.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
GSF71_RS07880	ymfI	1585483..1586214 (+)	732	WP_025016332.1	elongation factor P 5-aminopentanone reductase	-
GSF71_RS07885	-	1586296..1587219 (+)	924	WP_011374194.1	helix-turn-helix domain-containing protein	-
GSF71_RS07890	pgsA	1587245..1587829 (+)	585	WP_011374195.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
GSF71_RS07895	recA	1588012..1589079 (+)	1068	WP_011374196.1	recombinase RecA	Machinery gene
GSF71_RS07900	rny	1589466..1591031 (+)	1566	WP_011374197.1	ribonuclease Y	-
GSF71_RS07905	-	1591187..1592275 (+)	1089	WP_035144637.1	glycosyltransferase family 4 protein	-
GSF71_RS07910	-	1592302..1592967 (-)	666	WP_162100935.1	YigZ family protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38254.25 Da
• Isoelectric Point: 4.6316

>NTDB_id=419932 GSF71_RS07895 WP_011374196.1 1588012..1589079(+) (recA) [Latilactobacillus sakei strain MBEL1397]
MAKDERQAALDAALKKIEKNFGKGSIMRMGEKVDTQVSTVSSGSLALDEALGVGGYPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDILVVDSVAALVPRAEIEGEMG
DAHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPEVTPGGRALKFYSTVRLEVRRAETIKNGTDMIGN
RARIKVVKNKVAPPFKVAEVDIMYGQGISRTGELVDMAVEKDIINKSGSWYSYGSERIGQGRENAKNYLADHEDVEDEVR
LKVRAAYGISDVPEEDLPTTEDEQINILPDDSTEE

Nucleotide

• Length: 1068 bp

>NTDB_id=419932 GSF71_RS07895 WP_011374196.1 1588012..1589079(+) (recA) [Latilactobacillus sakei strain MBEL1397]
TTGGCTAAAGATGAAAGACAAGCAGCACTTGATGCTGCCCTAAAGAAGATTGAAAAGAATTTTGGTAAAGGTTCAATTAT
GCGAATGGGTGAAAAGGTTGATACACAAGTCTCAACAGTTTCATCTGGTTCATTGGCATTGGACGAAGCGCTCGGAGTAG
GTGGTTATCCTCGCGGCCGGATCGTTGAAATTTACGGTCCTGAAAGTTCAGGTAAAACAACCGTTGCGTTACATGCTGTT
GCAGAAGTGCAAAAGCAAGGTGGAACGGCTGCTTATATCGATGCTGAAAATGCGATGGATCCTAAGTATGCAACAGCACT
TGGCGTTAATATTGATGACTTACTCTTGTCACAACCTGATACTGGTGAACAAGGCTTAGAAATTGCTGATGCCTTGGTAT
CAAGTGGGGCCGTTGATATTTTAGTTGTCGATTCAGTTGCCGCTTTGGTACCACGTGCTGAAATCGAAGGTGAAATGGGT
GACGCCCACGTTGGCTTACAAGCGCGTTTGATGTCACAAGCCTTACGTAAATTATCAGGGACGATTAATAAGACGAAGAC
GATTGCGTTATTCATTAACCAAATTCGTGAAAAAGTCGGCGTGATGTTTGGTAACCCCGAAGTCACACCAGGTGGTCGTG
CTTTGAAGTTCTACTCAACTGTTCGGCTTGAAGTGCGTCGTGCTGAAACCATCAAAAATGGGACAGATATGATTGGGAAC
CGGGCCCGAATCAAAGTCGTTAAGAATAAGGTTGCGCCACCATTTAAGGTCGCTGAAGTTGATATCATGTACGGTCAAGG
GATTTCCAGAACCGGTGAATTGGTTGATATGGCGGTCGAAAAAGACATTATCAATAAGAGTGGTTCTTGGTACTCTTATG
GCTCAGAACGAATTGGCCAAGGGCGAGAAAATGCTAAGAACTATTTGGCTGATCACGAAGATGTCGAAGATGAAGTTCGT
TTGAAGGTCAGAGCAGCTTATGGTATTTCAGATGTACCTGAAGAAGATCTCCCAACAACTGAAGATGAACAAATAAATAT
TTTACCAGATGATTCAACAGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-269)

3D structure

• AlphaFold DB: A0A094Y0D2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	100	100	1
recA	Bacillus subtilis subsp. subtilis str. 168	74.924	92.113	0.69
recA	Streptococcus mutans UA159	68.208	97.465	0.665
recA	Streptococcus pyogenes NZ131	71.429	92.676	0.662
recA	Streptococcus pneumoniae D39	67.919	97.465	0.662
recA	Streptococcus pneumoniae Rx1	67.919	97.465	0.662
recA	Streptococcus pneumoniae R6	67.919	97.465	0.662
recA	Streptococcus pneumoniae TIGR4	67.919	97.465	0.662
recA	Lactococcus lactis subsp. cremoris KW2	70.359	94.085	0.662
recA	Streptococcus mitis SK321	68.222	96.62	0.659
recA	Streptococcus mitis NCTC 12261	69.486	93.239	0.648
recA	Neisseria gonorrhoeae strain FA1090	62.691	92.113	0.577
recA	Neisseria gonorrhoeae MS11	62.691	92.113	0.577
recA	Neisseria gonorrhoeae MS11	62.691	92.113	0.577
recA	Ralstonia pseudosolanacearum GMI1000	64.013	88.451	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.61	90.986	0.561
recA	Helicobacter pylori strain NCTC11637	54.902	100	0.552
recA	Helicobacter pylori 26695	54.902	100	0.552
recA	Vibrio cholerae strain A1552	60.748	90.423	0.549
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.748	90.423	0.549
recA	Pseudomonas stutzeri DSM 10701	57.227	95.493	0.546
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.327	92.113	0.546
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.021	92.113	0.544
recA	Acinetobacter baylyi ADP1	59.19	90.423	0.535
recA	Glaesserella parasuis strain SC1401	59.19	90.423	0.535
recA	Acinetobacter baumannii D1279779	58.567	90.423	0.53