Detailed information NTG0419622

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GUY17_RS05670
• Genome accession: NZ_CP048031
• Coordinates: 1316067..1317131 (+)
• Length: 354 a.a.
• NCBI ID: WP_059746422.1
• Uniprot ID: A0AAE6SRP9
• Organism: Shewanella sp. Arc9-LZ
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1311067..1322131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GUY17_RS05660 (GUY17_05665)	rpoS	1311854..1312825 (+)	972	WP_101085622.1	RNA polymerase sigma factor RpoS	-
GUY17_RS05665 (GUY17_05670)	mutS	1313184..1315781 (-)	2598	WP_162022556.1	DNA mismatch repair protein MutS	-
GUY17_RS05670 (GUY17_05675)	recA	1316067..1317131 (+)	1065	WP_059746422.1	recombinase RecA	Machinery gene
GUY17_RS05675 (GUY17_05680)	alaS	1317941..1320565 (+)	2625	WP_162022557.1	alanine--tRNA ligase	-
GUY17_RS05680 (GUY17_05685)	csrA	1321026..1321223 (+)	198	WP_011636538.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37751.19 Da
• Isoelectric Point: 5.0429

>NTDB_id=419622 GUY17_RS05670 WP_059746422.1 1316067..1317131(+) (recA) [Shewanella sp. Arc9-LZ]
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRTMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVG
NETRVKVVKNKIAAPFKQAEFQILYGQGINRTGELVDLGVAHKLVDKAGAWYSYKGEKIGQGRANAGKFLTENPVIASEI
NTTLRAMLLNGGANASDSKTESDENIDLETGEVF

Nucleotide

• Length: 1065 bp

>NTDB_id=419622 GUY17_RS05670 WP_059746422.1 1316067..1317131(+) (recA) [Shewanella sp. Arc9-LZ]
ATGAAGGTTGATCCAAATAAAGAGAAAGCACTAGCCGCCGTTTTAAGCCAAATTGAAAAGCAATTTGGTAAAGGCTCAAT
TATGAAGTTGGGCGAAGATCGCACAATGGATGTTGAAACTATCTCTACCGGTTCGCTTTCATTGGATATCGCACTCGGTG
CGGGCGGTTTGCCAATGGGACGTATCGTTGAAATTTACGGTCCAGAATCATCAGGTAAAACGACGTTAACTCTTGAAGTG
ATTGCCGCAGCGCAACGCGAAGGTAAAACTTGTGCGTTTATTGATGCTGAACATGCTCTTGACCCAATTTATGCGAAAAA
GTTAGGCGTAGATATTGATAACTTACTTTGTTCACAGCCAGATACTGGCGAACAAGCGCTAGAAATTTGTGATGCGTTAA
CTCGTTCTGGTGCTGTAGACGTTATTGTGGTCGATTCTGTTGCAGCGTTAACGCCAAAAGCTGAAATTGAAGGTGAAATT
GGTGATTCACATATGGGCCTTGCCGCTCGTATGATGAGCCAAGCTATGCGTAAGCTGGCTGGTAATCTTAAGCAATCAAA
TACTTTGCTTATTTTTATTAACCAAATTCGTATGAAAATTGGTGTGATGTTTGGTAGCCCAGAAACAACTACCGGTGGTA
ATGCACTAAAGTTCTACGCTTCAGTACGTTTAGATATTCGTCGTACCGGTGCCATTAAAGACGGCGACGAAGTTGTCGGT
AATGAAACCCGCGTTAAAGTGGTTAAAAACAAAATTGCGGCTCCATTTAAGCAAGCTGAATTCCAAATCCTTTATGGACA
AGGTATTAACCGTACTGGTGAGTTAGTCGATCTAGGTGTTGCGCACAAGTTAGTTGATAAAGCGGGTGCTTGGTATAGCT
ACAAAGGCGAGAAAATTGGTCAAGGCCGTGCTAATGCAGGTAAATTCTTGACTGAAAACCCCGTCATTGCCAGTGAAATT
AATACCACTTTACGTGCGATGTTATTGAATGGTGGTGCTAATGCATCAGATTCTAAAACAGAAAGTGATGAGAATATTGA
CCTTGAAACGGGTGAAGTATTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	84.146	92.655	0.78
recA	Vibrio cholerae O1 biovar El Tor strain E7946	84.146	92.655	0.78
recA	Pseudomonas stutzeri DSM 10701	73.021	96.328	0.703
recA	Acinetobacter baumannii D1279779	70.52	97.74	0.689
recA	Acinetobacter baylyi ADP1	69.942	97.74	0.684
recA	Glaesserella parasuis strain SC1401	68.678	98.305	0.675
recA	Neisseria gonorrhoeae MS11	69.113	92.373	0.638
recA	Neisseria gonorrhoeae MS11	69.113	92.373	0.638
recA	Neisseria gonorrhoeae strain FA1090	69.113	92.373	0.638
recA	Ralstonia pseudosolanacearum GMI1000	71.704	87.853	0.63
recA	Streptococcus mitis NCTC 12261	59.104	100	0.596
recA	Streptococcus mitis SK321	59.104	100	0.596
recA	Streptococcus pneumoniae D39	60.172	98.588	0.593
recA	Streptococcus pneumoniae TIGR4	60.172	98.588	0.593
recA	Streptococcus pneumoniae Rx1	60.172	98.588	0.593
recA	Streptococcus pneumoniae R6	60.172	98.588	0.593
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.641	96.893	0.588
recA	Streptococcus mutans UA159	58.857	98.87	0.582
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.261	94.068	0.576
recA	Bacillus subtilis subsp. subtilis str. 168	62.813	90.395	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	58.48	96.61	0.565
recA	Streptococcus pyogenes NZ131	60.976	92.655	0.565
recA	Helicobacter pylori strain NCTC11637	61.043	92.09	0.562
recA	Helicobacter pylori 26695	60.736	92.09	0.559
recA	Lactococcus lactis subsp. cremoris KW2	59.878	92.938	0.556
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.202	92.09	0.545