Detailed information NTG0041962

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CVAR_RS08535
• Genome accession: NC_015859
• Coordinates: 1847669..1848808 (-)
• Length: 379 a.a.
• NCBI ID: WP_014010136.1
• Uniprot ID: G0HEI5
• Organism: Corynebacterium variabile DSM 44702
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1842669..1853808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CVAR_RS08510 (CVAR_1612)	-	1843752..1844480 (+)	729	WP_041630040.1	amino acid ABC transporter ATP-binding protein	-
CVAR_RS08515 (CVAR_1613)	-	1844492..1845385 (+)	894	WP_014010132.1	glutamate ABC transporter substrate-binding protein	-
CVAR_RS08520 (CVAR_1614)	-	1845406..1846095 (+)	690	WP_014010133.1	amino acid ABC transporter permease	-
CVAR_RS08525 (CVAR_1615)	-	1846095..1847036 (+)	942	WP_014010134.1	amino acid ABC transporter permease	-
CVAR_RS08530 (CVAR_1616)	-	1847048..1847665 (-)	618	WP_014010135.1	regulatory protein RecX	-
CVAR_RS08535 (CVAR_1617)	recA	1847669..1848808 (-)	1140	WP_014010136.1	recombinase RecA	Machinery gene
CVAR_RS08540 (CVAR_1618)	-	1848978..1849184 (-)	207	WP_041630597.1	DUF3046 domain-containing protein	-
CVAR_RS08545 (CVAR_1619)	-	1849290..1849937 (+)	648	WP_041630041.1	biotin transporter BioY	-
CVAR_RS08550 (CVAR_1620)	-	1849937..1850644 (+)	708	WP_041630042.1	energy-coupling factor ABC transporter ATP-binding protein	-
CVAR_RS08555 (CVAR_1621)	-	1850641..1851273 (+)	633	WP_014010140.1	energy-coupling factor transporter transmembrane protein EcfT	-
CVAR_RS08560 (CVAR_1622)	-	1851277..1852122 (-)	846	WP_014010141.1	PspA/IM30 family protein	-
CVAR_RS08565 (CVAR_1623)	-	1852178..1852588 (-)	411	WP_014010142.1	helix-turn-helix domain-containing protein	-
CVAR_RS08570 (CVAR_1624)	-	1852667..1853227 (-)	561	WP_014010143.1	CinA family protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40203.66 Da
• Isoelectric Point: 4.6371

>NTDB_id=41962 CVAR_RS08535 WP_014010136.1 1847669..1848808(-) (recA) [Corynebacterium variabile DSM 44702]
MAAKKKGPGGAGADRQKALDLAMAQIEKDYGKGAVMRLGDDERPPIQVIPSGNIAINVALGIGGFPRGRIVEIYGPESSG
KTTVALHAIAEAQKAGGIAAFIDAEHALDPEYAKKLGVDTDNLLVSQPDTGEQALEIADMLVRSGAISVIVVDSVAALTP
KAEIEGDMGDSHVGLQARLMSQALRKMTGALSQTGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRCDVRRIQTL
KDGQDAVGNRTKMKIVKNKVSPPFKIAEFDIVYGEGISREGSIIDLGVENGLVKKSGSWYTYKGDQLGQGKEKAREFLKE
SPELSAEIEDGIMRALKVGPYAKADATAEEDAPMDVPGMDPADAPIDVVPTFDDDEDDD

Nucleotide

• Length: 1140 bp

>NTDB_id=41962 CVAR_RS08535 WP_014010136.1 1847669..1848808(-) (recA) [Corynebacterium variabile DSM 44702]
ATGGCTGCTAAGAAGAAGGGTCCGGGCGGGGCAGGCGCCGACCGGCAGAAGGCGCTTGACCTGGCGATGGCCCAGATCGA
GAAGGACTACGGCAAGGGTGCCGTGATGCGTCTGGGTGACGACGAGCGCCCGCCGATCCAGGTCATCCCCAGCGGCAACA
TCGCCATCAATGTCGCTCTCGGCATCGGTGGCTTCCCCCGTGGCCGCATCGTGGAGATCTACGGACCGGAGTCCTCAGGA
AAGACCACCGTGGCGCTCCACGCCATCGCCGAGGCCCAGAAAGCCGGCGGTATCGCCGCGTTTATCGACGCGGAGCATGC
CCTGGACCCCGAGTACGCCAAGAAGCTGGGTGTGGACACCGACAACCTGCTGGTTTCCCAGCCGGACACCGGTGAACAGG
CCCTCGAGATCGCCGACATGCTGGTCCGCTCCGGCGCGATCTCCGTCATCGTCGTCGACTCGGTCGCCGCGCTGACACCG
AAGGCCGAGATCGAGGGCGACATGGGAGACAGTCACGTCGGTCTGCAGGCCCGTCTGATGAGCCAGGCACTGCGCAAGAT
GACCGGCGCGCTGAGCCAGACCGGCACCACCGCGATCTTCATCAACCAGCTCCGCGAGAAGATCGGCGTCATGTTCGGAT
CCCCGGAGACGACGACCGGTGGTAAGGCCCTGAAGTTCTACGCTTCGGTGCGTTGCGACGTGCGTCGCATCCAGACCCTC
AAGGACGGCCAGGACGCGGTGGGCAACCGCACCAAGATGAAGATCGTCAAGAACAAGGTATCGCCGCCGTTCAAGATCGC
CGAGTTCGACATCGTCTACGGCGAAGGCATCTCCCGCGAGGGCTCGATCATCGACCTCGGCGTGGAGAACGGGCTGGTCA
AGAAGTCCGGCTCCTGGTACACGTACAAGGGTGACCAGCTCGGTCAGGGCAAGGAGAAGGCCCGCGAGTTCCTCAAGGAG
AGCCCGGAGCTTTCCGCGGAGATCGAAGACGGCATCATGCGTGCCCTCAAGGTCGGCCCCTACGCCAAGGCTGACGCCAC
CGCGGAGGAGGACGCCCCGATGGACGTGCCCGGCATGGACCCGGCCGATGCGCCGATCGACGTCGTGCCGACCTTCGACG
ATGACGAGGACGACGACTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (17-278)

3D structure

• AlphaFold DB: G0HEI5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	63.663	90.765	0.578
recA	Bacillus subtilis subsp. subtilis str. 168	68.125	84.433	0.575
recA	Acinetobacter baylyi ADP1	61.272	91.293	0.559
recA	Ralstonia pseudosolanacearum GMI1000	64.923	85.752	0.557
recA	Helicobacter pylori 26695	66.139	83.377	0.551
recA	Helicobacter pylori strain NCTC11637	66.139	83.377	0.551
recA	Neisseria gonorrhoeae MS11	64	85.752	0.549
recA	Neisseria gonorrhoeae strain FA1090	64	85.752	0.549
recA	Neisseria gonorrhoeae MS11	64	85.752	0.549
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.424	87.071	0.544
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.691	86.28	0.541
recA	Glaesserella parasuis strain SC1401	61.377	88.127	0.541
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.883	86.016	0.541
recA	Acinetobacter baumannii D1279779	63.158	85.224	0.538
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.385	86.28	0.538
recA	Vibrio cholerae strain A1552	62.385	86.28	0.538
recA	Lactococcus lactis subsp. cremoris KW2	61.28	86.544	0.53
recA	Streptococcus mitis SK321	62.112	84.96	0.528
recA	Streptococcus mutans UA159	61.231	85.752	0.525
recA	Streptococcus pneumoniae D39	61.801	84.96	0.525
recA	Streptococcus pneumoniae R6	61.801	84.96	0.525
recA	Streptococcus pneumoniae TIGR4	61.801	84.96	0.525
recA	Streptococcus pyogenes NZ131	61.801	84.96	0.525
recA	Streptococcus mitis NCTC 12261	61.801	84.96	0.525
recA	Streptococcus pneumoniae Rx1	61.801	84.96	0.525
recA	Latilactobacillus sakei subsp. sakei 23K	58.017	90.501	0.525