Detailed information NTG0418837

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FX986_RS07270
• Genome accession: NZ_CP047970
• Coordinates: 1762150..1763211 (-)
• Length: 353 a.a.
• NCBI ID: WP_077377977.1
• Uniprot ID: -
• Organism: Cobetia marina strain GPM2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1757150..1768211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FX986_RS07255	-	1757155..1758402 (-)	1248	WP_077377982.1	aspartate kinase	-
FX986_RS07260	alaS	1758512..1761115 (-)	2604	WP_191237703.1	alanine--tRNA ligase	-
FX986_RS07265	-	1761364..1762002 (-)	639	WP_254696568.1	regulatory protein RecX	-
FX986_RS07270	recA	1762150..1763211 (-)	1062	WP_077377977.1	recombinase RecA	Machinery gene
FX986_RS07275	-	1763443..1763964 (-)	522	WP_191237704.1	CinA family protein	-
FX986_RS07280	mutS	1764133..1766712 (+)	2580	WP_191237705.1	DNA mismatch repair protein MutS	-
FX986_RS07285	fdxA	1766965..1767288 (+)	324	WP_077377971.1	ferredoxin FdxA	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37798.00 Da
• Isoelectric Point: 4.7785

>NTDB_id=418837 FX986_RS07270 WP_077377977.1 1762150..1763211(-) (recA) [Cobetia marina strain GPM2]
MAQDDNRTKALNAALSQIERQFGKGAVMRMGDAPRVAIPSVSTGSLGLDIALGIGGLPFGRVVEIYGPESSGKTTLTLSV
IAQAQKQGKVCAFIDAEHALDPSYAEKLGVNLDEMLVSQPDTGEQALEIVDMLVRSGGVDVIIVDSVAALTPRAEIEGEM
GDSHVGLQARLMSQALRKVTGHIKNANCMVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSVKSGDEVTG
NETRVKVVKNKVAPPFRQAEFQILYGKGIYHAGEVIDLGVQCGLVGKAGAWYSYQGSKIGQGKANSAQYLEDNPAIMEEI
ESQIRAQLLASPETKEEAKEEVVAENEDDLDLD

Nucleotide

• Length: 1062 bp

>NTDB_id=418837 FX986_RS07270 WP_077377977.1 1762150..1763211(-) (recA) [Cobetia marina strain GPM2]
ATGGCACAGGACGACAATCGTACCAAGGCGCTGAACGCGGCGCTGTCCCAGATCGAGCGCCAGTTCGGCAAGGGCGCCGT
CATGCGCATGGGCGATGCCCCGCGTGTGGCCATCCCGTCGGTATCCACCGGGTCTCTGGGCCTGGATATCGCGCTCGGCA
TCGGTGGCCTGCCTTTCGGTCGAGTGGTCGAGATCTACGGTCCGGAATCCTCGGGCAAGACGACACTGACGCTCTCGGTC
ATCGCCCAGGCCCAGAAGCAGGGCAAGGTGTGTGCCTTCATCGATGCCGAGCACGCGCTGGATCCGTCCTACGCCGAGAA
GCTGGGCGTCAATCTGGACGAGATGCTGGTCTCCCAGCCGGATACCGGTGAGCAGGCACTCGAGATCGTCGACATGCTGG
TGCGTTCCGGTGGTGTCGACGTCATCATCGTCGATTCCGTGGCAGCCCTGACGCCGCGTGCCGAGATCGAGGGTGAGATG
GGTGACTCCCACGTCGGCCTGCAGGCGCGTCTGATGTCCCAGGCGCTGCGCAAGGTGACGGGCCACATCAAGAATGCCAA
CTGCATGGTAGTGTTCATCAACCAGATCCGCATGAAGATCGGGGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTA
ACGCGCTGAAGTTCTACTCGAGTGTCCGTCTCGACATCCGTCGTACCGGCTCCGTGAAGTCCGGCGATGAAGTCACCGGT
AACGAGACTCGCGTCAAGGTCGTGAAGAACAAGGTCGCGCCGCCGTTCCGCCAGGCCGAGTTCCAGATTCTCTACGGCAA
GGGCATCTACCACGCCGGTGAGGTCATTGATCTGGGCGTGCAGTGTGGTCTGGTCGGCAAGGCAGGTGCCTGGTACAGCT
ACCAGGGCAGCAAGATCGGTCAGGGCAAGGCCAACTCCGCCCAGTATCTGGAGGACAACCCCGCGATCATGGAAGAGATC
GAGAGCCAGATTCGCGCCCAGCTGCTGGCTTCTCCGGAAACCAAGGAAGAGGCCAAGGAAGAAGTGGTCGCCGAAAATGA
AGATGATCTGGATCTCGATTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	79.656	98.867	0.788
recA	Acinetobacter baylyi ADP1	73.199	98.3	0.72
recA	Acinetobacter baumannii D1279779	74.39	92.918	0.691
recA	Vibrio cholerae strain A1552	70.393	93.768	0.66
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.393	93.768	0.66
recA	Neisseria gonorrhoeae MS11	72.136	91.501	0.66
recA	Neisseria gonorrhoeae MS11	72.136	91.501	0.66
recA	Neisseria gonorrhoeae strain FA1090	72.136	91.501	0.66
recA	Glaesserella parasuis strain SC1401	70.303	93.484	0.657
recA	Ralstonia pseudosolanacearum GMI1000	69.538	92.068	0.64
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.19	92.351	0.584
recA	Helicobacter pylori 26695	61.078	94.618	0.578
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.261	94.334	0.578
recA	Streptococcus pyogenes NZ131	57.224	100	0.572
recA	Bacillus subtilis subsp. subtilis str. 168	63.125	90.652	0.572
recA	Helicobacter pylori strain NCTC11637	60.479	94.618	0.572
recA	Streptococcus mutans UA159	55.191	100	0.572
recA	Streptococcus pneumoniae Rx1	55.278	100	0.564
recA	Streptococcus pneumoniae TIGR4	55.278	100	0.564
recA	Streptococcus pneumoniae R6	55.278	100	0.564
recA	Streptococcus pneumoniae D39	55.278	100	0.564
recA	Streptococcus mitis NCTC 12261	58.065	96.601	0.561
recA	Streptococcus mitis SK321	57.895	96.884	0.561
recA	Latilactobacillus sakei subsp. sakei 23K	59.509	92.351	0.55
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.538	92.068	0.53
recA	Lactococcus lactis subsp. cremoris KW2	56.79	91.785	0.521