Detailed information NTG0041638

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: NIT79A3_RS01185
• Genome accession: NC_015731
• Coordinates: 276222..277286 (+)
• Length: 354 a.a.
• NCBI ID: WP_013964447.1
• Uniprot ID: -
• Organism: Nitrosomonas sp. Is79A3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 271222..282286

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NIT79A3_RS01170 (Nit79A3_0234)	-	271653..273710 (-)	2058	WP_013964444.1	sodium-translocating pyrophosphatase	-
NIT79A3_RS01175 (Nit79A3_0235)	-	273944..275203 (-)	1260	WP_013964445.1	6-phosphofructokinase	-
NIT79A3_RS01180 (Nit79A3_0236)	adk	275352..276005 (-)	654	WP_041360033.1	adenylate kinase	-
NIT79A3_RS01185 (Nit79A3_0237)	recA	276222..277286 (+)	1065	WP_013964447.1	recombinase RecA	Machinery gene
NIT79A3_RS01190 (Nit79A3_0238)	recX	277292..277750 (+)	459	WP_013964448.1	recombination regulator RecX	-
NIT79A3_RS01195 (Nit79A3_0239)	-	277747..278112 (+)	366	WP_013964449.1	hypothetical protein	-
NIT79A3_RS01200 (Nit79A3_0240)	alaS	278109..280706 (+)	2598	WP_013964450.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38731.55 Da
• Isoelectric Point: 7.3980

>NTDB_id=41638 NIT79A3_RS01185 WP_013964447.1 276222..277286(+) (recA) [Nitrosomonas sp. Is79A3]
MDENRSKALDAALAQIEKQFGKGSIMRLGANDVAYDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLTLQVI
AEMQKMGGTAAFIDAEHALDPQYAQKIGVNVKELLISQPDNGEQALEIADMLVRSGSVDIVVVDSVAALTPRAEIEGDMG
DPQMGLQARLMSQALRKLTANIKRSNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKKGEEVIGN
ETRVKVVKNKVAPPFKQADFDILYGEGISRDSEIIELGVLHKLIDKSGAWYAYKGEKIGQGKDNVREYLKEHKEIAHEIE
QKIRSIVGIVDQARPVKEKVEKEKADKEKADKEK

Nucleotide

• Length: 1065 bp

>NTDB_id=41638 NIT79A3_RS01185 WP_013964447.1 276222..277286(+) (recA) [Nitrosomonas sp. Is79A3]
ATGGACGAAAACAGAAGTAAAGCGCTTGATGCTGCACTAGCCCAAATTGAGAAACAGTTTGGTAAAGGCTCAATCATGCG
ACTGGGCGCAAACGATGTCGCCTATGATATACAGGTTGTTTCTACCGGTTCGTTGGGACTTGATATTGCACTCGGTGTGG
GAGGGTTGCCACGTGGCCGGGTTATTGAAATTTATGGGCCTGAATCCTCGGGTAAAACTACGCTGACATTGCAAGTCATT
GCAGAGATGCAAAAAATGGGTGGTACCGCAGCATTTATTGATGCAGAGCACGCATTGGACCCGCAATATGCGCAGAAAAT
TGGTGTTAATGTCAAAGAATTGTTGATCTCTCAACCCGATAACGGTGAGCAAGCGTTAGAAATAGCCGACATGCTGGTGC
GTTCCGGCTCAGTTGATATTGTCGTGGTGGATTCAGTCGCAGCACTCACGCCACGTGCAGAAATAGAAGGCGACATGGGT
GATCCTCAAATGGGATTGCAAGCACGATTAATGTCACAAGCTTTGCGCAAACTGACCGCAAATATCAAACGCAGCAATAC
CATGGTTATTTTCATTAACCAAATTCGCATGAAAATCGGCGTTATGTTCGGCAACCCAGAAACAACGACGGGTGGCAACG
CATTAAAATTTTATGCTTCCGTCCGCCTTGATATTCGCCGCACCGGGTCGATCAAAAAAGGTGAAGAGGTAATTGGCAAT
GAAACGCGCGTTAAAGTGGTTAAAAATAAAGTAGCTCCACCGTTCAAACAAGCTGATTTCGATATTTTGTATGGCGAAGG
TATTTCCCGTGATAGTGAAATTATCGAATTGGGTGTATTGCATAAGCTCATCGACAAATCGGGCGCTTGGTATGCCTACA
AAGGTGAGAAAATCGGCCAAGGCAAGGACAATGTGCGTGAATACCTGAAGGAACATAAAGAAATAGCCCATGAAATTGAA
CAAAAGATCCGTTCGATTGTAGGCATTGTGGATCAGGCCAGACCTGTAAAAGAGAAAGTCGAGAAAGAAAAAGCAGATAA
AGAAAAAGCAGATAAAGAAAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	74.772	92.938	0.695
recA	Pseudomonas stutzeri DSM 10701	71.554	96.328	0.689
recA	Neisseria gonorrhoeae MS11	72.34	92.938	0.672
recA	Neisseria gonorrhoeae MS11	72.34	92.938	0.672
recA	Neisseria gonorrhoeae strain FA1090	72.34	92.938	0.672
recA	Acinetobacter baumannii D1279779	72.84	91.525	0.667
recA	Vibrio cholerae strain A1552	72.171	92.373	0.667
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.171	92.373	0.667
recA	Glaesserella parasuis strain SC1401	72.308	91.808	0.664
recA	Acinetobacter baylyi ADP1	71.914	91.525	0.658
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.159	92.655	0.613
recA	Bacillus subtilis subsp. subtilis str. 168	65.951	92.09	0.607
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.848	93.22	0.605
recA	Streptococcus pneumoniae Rx1	60.745	98.588	0.599
recA	Streptococcus pneumoniae TIGR4	60.745	98.588	0.599
recA	Streptococcus pneumoniae R6	60.745	98.588	0.599
recA	Streptococcus pneumoniae D39	60.745	98.588	0.599
recA	Streptococcus mutans UA159	59.605	100	0.596
recA	Helicobacter pylori 26695	61.176	96.045	0.588
recA	Helicobacter pylori strain NCTC11637	60.882	96.045	0.585
recA	Latilactobacillus sakei subsp. sakei 23K	62.614	92.938	0.582
recA	Streptococcus mitis NCTC 12261	61.934	93.503	0.579
recA	Streptococcus pyogenes NZ131	61.818	93.22	0.576
recA	Streptococcus mitis SK321	61.631	93.503	0.576
recA	Lactococcus lactis subsp. cremoris KW2	60	94.633	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.037	91.525	0.568