Detailed information NTG0041540

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: PUV_RS00030
• Genome accession: NC_015702
• Coordinates: 4990..6063 (-)
• Length: 357 a.a.
• NCBI ID: WP_006340700.1
• Uniprot ID: F8L286
• Organism: Parachlamydia acanthamoebae UV-7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1..11063

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PUV_RS00005 (PUV_00010)	-	119..850 (+)	732	WP_013924053.1	M17 family peptidase N-terminal domain-containing protein	-
PUV_RS00010 (PUV_00020)	-	894..1544 (-)	651	WP_013924054.1	hydrolase	-
PUV_RS00015 (PUV_00040)	-	2248..2949 (+)	702	WP_006340697.1	UDP-N-acetylglucosamine diphosphorylase	-
PUV_RS00020 (PUV_00050)	-	2942..3994 (+)	1053	WP_006340698.1	hypothetical protein	-
PUV_RS00025 (PUV_00060)	-	4094..4987 (+)	894	WP_013924056.1	polyprenyl synthetase family protein	-
PUV_RS00030 (PUV_00070)	recA	4990..6063 (-)	1074	WP_006340700.1	recombinase RecA	Machinery gene
PUV_RS00035 (PUV_00080)	-	6437..7918 (+)	1482	WP_013924057.1	hypothetical protein	-
PUV_RS00040 (PUV_00090)	-	7948..8760 (-)	813	WP_013924058.1	inositol monophosphatase family protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38254.81 Da
• Isoelectric Point: 6.6578

>NTDB_id=41540 PUV_RS00030 WP_006340700.1 4990..6063(-) (recA) [Parachlamydia acanthamoebae UV-7]
MAQPSEAERKKALDLAVSHIKKQFGDGAIMSLGSHSSMREISVIKTGALTLDVALGIGGIPRGRIIEIFGPESSGKSTLA
THIVANAQKAGGLAAYIDAEHALDPSYAAKIGVNVDELLISQPDSGEEALNIAETLARSNAVDVIVIDSVAALVPKSELE
GEIGDSFIGLQARMMSQALRKLAATLAKSNTCAIFINQIREKIGVMFGNPETTTGGRALKFYSSIRLDIRRTAGIKGPDN
SEVGNRVKVKVVKNKVAPPFRSAEFDILFNEGISRTGAVIDLGTEYQIIDKKGAWFSYQGQRLGQGREAVRDELKTNPKL
LDEIEQLIMQKCKDGLATTSLKSAAHVDADEKELVEV

Nucleotide

• Length: 1074 bp

>NTDB_id=41540 PUV_RS00030 WP_006340700.1 4990..6063(-) (recA) [Parachlamydia acanthamoebae UV-7]
ATGGCTCAACCTAGTGAAGCAGAAAGAAAAAAGGCTCTTGACCTAGCGGTCAGTCATATTAAAAAACAATTTGGAGATGG
AGCGATTATGTCGCTTGGAAGTCACTCTTCCATGCGCGAAATTAGCGTCATCAAAACAGGCGCTTTAACTTTAGACGTTG
CGCTTGGCATCGGCGGGATACCTCGCGGCCGTATTATTGAAATCTTCGGTCCCGAATCTTCCGGAAAATCAACTTTGGCC
ACTCACATTGTGGCAAATGCCCAAAAAGCAGGCGGACTTGCTGCGTATATCGACGCAGAGCATGCGCTTGATCCTTCCTA
TGCTGCAAAAATTGGGGTAAATGTGGATGAACTTCTCATTTCACAGCCCGATAGTGGTGAAGAAGCGCTTAACATCGCAG
AAACACTTGCACGTTCAAATGCAGTGGATGTGATTGTAATCGACTCCGTTGCAGCGCTTGTTCCAAAAAGTGAGCTAGAA
GGCGAAATCGGCGATAGCTTTATCGGTTTGCAGGCTCGTATGATGTCTCAAGCTTTAAGAAAACTCGCTGCAACACTTGC
TAAAAGCAATACCTGCGCCATTTTCATTAACCAAATTCGTGAAAAAATTGGTGTCATGTTTGGAAACCCCGAGACAACAA
CGGGTGGGCGTGCGTTAAAGTTCTACTCCTCTATTCGCCTAGATATTCGCCGTACCGCTGGTATTAAAGGTCCTGACAAC
TCTGAAGTTGGAAATAGAGTCAAAGTGAAAGTTGTCAAAAATAAAGTTGCGCCACCTTTCCGCTCAGCTGAATTTGACAT
TCTCTTTAACGAAGGAATTTCTAGAACAGGAGCTGTTATCGATTTAGGAACAGAGTACCAGATTATCGATAAAAAAGGCG
CTTGGTTTAGCTATCAGGGGCAGAGATTGGGACAAGGGCGAGAAGCTGTCCGCGATGAGCTAAAAACGAATCCAAAGCTA
TTGGATGAAATTGAGCAGCTTATCATGCAAAAATGTAAAGATGGACTGGCTACAACATCACTCAAGTCTGCTGCACATGT
TGATGCTGACGAAAAAGAGCTTGTTGAAGTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (11-274)

3D structure

• AlphaFold DB: F8L286

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	62.733	90.196	0.566
recA	Streptococcus mitis NCTC 12261	56.338	99.44	0.56
recA	Streptococcus mutans UA159	56.818	98.599	0.56
recA	Pseudomonas stutzeri DSM 10701	57.895	95.798	0.555
recA	Glaesserella parasuis strain SC1401	56.25	98.599	0.555
recA	Streptococcus pyogenes NZ131	60.245	91.597	0.552
recA	Ralstonia pseudosolanacearum GMI1000	61.18	90.196	0.552
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.059	89.916	0.549
recA	Neisseria gonorrhoeae MS11	60.748	89.916	0.546
recA	Neisseria gonorrhoeae strain FA1090	60.748	89.916	0.546
recA	Neisseria gonorrhoeae MS11	60.748	89.916	0.546
recA	Streptococcus pneumoniae TIGR4	58.537	91.877	0.538
recA	Streptococcus pneumoniae Rx1	58.537	91.877	0.538
recA	Streptococcus pneumoniae D39	58.537	91.877	0.538
recA	Streptococcus pneumoniae R6	58.537	91.877	0.538
recA	Acinetobacter baylyi ADP1	55.814	96.359	0.538
recA	Streptococcus mitis SK321	58.769	91.036	0.535
recA	Lactococcus lactis subsp. cremoris KW2	58.462	91.036	0.532
recA	Acinetobacter baumannii D1279779	54.942	96.359	0.529
recA	Helicobacter pylori strain NCTC11637	58.75	89.636	0.527
recA	Helicobacter pylori 26695	58.75	89.636	0.527
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	56.667	92.437	0.524
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.655	94.118	0.524
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.936	87.395	0.524
recA	Vibrio cholerae strain A1552	59.936	87.395	0.524
recA	Latilactobacillus sakei subsp. sakei 23K	58.805	89.076	0.524