Detailed information NTG0414375

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: Ami3637_RS16505
• Genome accession: NZ_CP047591
• Coordinates: 3413460..3414548 (-)
• Length: 362 a.a.
• NCBI ID: WP_162363526.1
• Uniprot ID: A0A6P1MKT9
• Organism: Aminipila terrae strain CBA3637
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3408460..3419548

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Ami3637_RS16475 (Ami3637_16440)	-	3410264..3410518 (-)	255	WP_162363521.1	hypothetical protein	-
Ami3637_RS16480 (Ami3637_16445)	-	3410620..3410796 (-)	177	WP_162363522.1	hypothetical protein	-
Ami3637_RS16485 (Ami3637_16450)	-	3410855..3411112 (-)	258	WP_162363523.1	hypothetical protein	-
Ami3637_RS16490 (Ami3637_16455)	obgE	3411215..3412510 (-)	1296	WP_162363524.1	GTPase ObgE	-
Ami3637_RS16495 (Ami3637_16460)	rpmA	3412600..3412860 (-)	261	WP_128745471.1	50S ribosomal protein L27	-
Ami3637_RS16500 (Ami3637_16465)	rplU	3412943..3413305 (-)	363	WP_162363525.1	50S ribosomal protein L21	-
Ami3637_RS16505 (Ami3637_16470)	recA	3413460..3414548 (-)	1089	WP_162363526.1	recombinase RecA	Machinery gene
Ami3637_RS16510 (Ami3637_16475)	-	3414729..3415234 (-)	506	Protein_3333	CinA family protein	-
Ami3637_RS16515 (Ami3637_16480)	pgsA	3415317..3415856 (-)	540	WP_162363527.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
Ami3637_RS16520 (Ami3637_16485)	rimO	3415859..3417208 (-)	1350	WP_162363528.1	30S ribosomal protein S12 methylthiotransferase RimO	-
Ami3637_RS16525 (Ami3637_16490)	-	3417361..3417537 (-)	177	WP_162363529.1	hypothetical protein	-
Ami3637_RS19200 (Ami3637_16495)	-	3417740..3417952 (+)	213	WP_162363530.1	helix-turn-helix domain-containing protein	-
Ami3637_RS16535 (Ami3637_16500)	-	3418058..3418306 (-)	249	WP_162363531.1	phage holin	-
Ami3637_RS16540 (Ami3637_16505)	-	3418303..3418572 (-)	270	WP_162363532.1	hypothetical protein	-
Ami3637_RS16545 (Ami3637_16510)	-	3418584..3419324 (-)	741	WP_162363533.1	N-acetylmuramoyl-L-alanine amidase	-

Sequence

Protein

• Length: 362 a.a.
• Molecular weight: 39493.19 Da
• Isoelectric Point: 5.0260

>NTDB_id=414375 Ami3637_RS16505 WP_162363526.1 3413460..3414548(-) (recA) [Aminipila terrae strain CBA3637]
MAANKEVNININKNEKDKALKEAMAQIQKQFGQGAIMKLGDDTARLNIEAISTGSVSLDIASGIGGIPRGRIIEIYGPES
SGKTTLTLHVIAEAQKAGGKAAFIDAEHALDPEYARNLGVDVDELLVSQPDTGEQALEICEMLVRSGALDIVVVDSVAAL
VPRAEIQGEMGDSHVGLQARLMSQALRKLTGSINKSNTAVIFINQLREKVGVMFGNPETTTGGRALKFYSTMRFDVRKIE
SIKVGDEVLGNRTRVKIVKNKVAPPFKQAEFDIMYGTGISKEGDVLDCAVEAKIVEKAGSWYSFDGNRIGQGRENVKRYL
MENPEILNKVEFLLKENMKPKTEEEKKEDGLLVDEDGVVIEQ

Nucleotide

• Length: 1089 bp

>NTDB_id=414375 Ami3637_RS16505 WP_162363526.1 3413460..3414548(-) (recA) [Aminipila terrae strain CBA3637]
ATGGCAGCTAATAAGGAAGTCAATATTAATATAAATAAAAATGAAAAGGACAAAGCTCTTAAAGAAGCTATGGCTCAGAT
CCAAAAGCAGTTTGGACAGGGAGCAATCATGAAACTGGGAGATGATACGGCCAGATTAAATATTGAAGCTATTTCCACAG
GTTCAGTAAGCCTTGATATTGCTAGTGGTATAGGAGGCATTCCAAGAGGAAGAATAATTGAAATTTATGGACCTGAATCT
TCAGGTAAAACGACCCTTACCCTTCATGTAATCGCAGAAGCGCAGAAGGCAGGAGGCAAAGCTGCATTTATTGATGCAGA
GCATGCCCTTGACCCTGAATATGCAAGAAATCTGGGGGTAGATGTAGATGAGCTGCTGGTATCCCAGCCTGATACAGGGG
AACAGGCACTGGAAATCTGTGAAATGCTGGTTCGTAGTGGTGCGCTGGATATTGTAGTAGTAGACTCTGTAGCTGCATTG
GTTCCAAGAGCAGAAATCCAGGGAGAAATGGGAGACAGCCACGTAGGACTTCAGGCGAGACTTATGTCCCAGGCCCTTAG
AAAGCTGACTGGCAGTATTAACAAATCAAATACTGCAGTGATTTTTATAAATCAGCTGCGTGAAAAAGTGGGGGTTATGT
TCGGAAACCCTGAGACTACAACAGGAGGTCGTGCTCTTAAATTCTATTCAACCATGCGTTTTGATGTGAGAAAAATTGAA
AGCATTAAAGTGGGTGATGAGGTTCTGGGAAACAGAACAAGAGTAAAAATAGTGAAGAATAAAGTTGCCCCTCCATTTAA
ACAGGCTGAGTTTGATATCATGTATGGAACTGGAATTTCTAAAGAAGGTGATGTACTGGATTGTGCTGTTGAAGCTAAGA
TTGTAGAAAAAGCCGGATCCTGGTATAGTTTCGATGGAAACCGAATTGGACAGGGAAGAGAAAATGTTAAGAGATATCTG
ATGGAAAATCCGGAGATTTTAAATAAAGTTGAATTCTTATTAAAAGAAAATATGAAGCCTAAAACAGAGGAAGAAAAGAA
GGAAGACGGTCTGTTAGTAGACGAGGACGGCGTGGTTATCGAACAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

3D structure

• AlphaFold DB: A0A6P1MKT9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	63.873	95.58	0.61
recA	Neisseria gonorrhoeae MS11	63.873	95.58	0.61
recA	Neisseria gonorrhoeae strain FA1090	63.873	95.58	0.61
recA	Bacillus subtilis subsp. subtilis str. 168	66.975	89.503	0.599
recA	Acinetobacter baumannii D1279779	63.081	95.028	0.599
recA	Acinetobacter baylyi ADP1	64.157	91.713	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	61.449	95.304	0.586
recA	Glaesserella parasuis strain SC1401	62.611	93.094	0.583
recA	Streptococcus mutans UA159	57.418	100	0.577
recA	Pseudomonas stutzeri DSM 10701	66.139	87.293	0.577
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.798	88.674	0.575
recA	Vibrio cholerae strain A1552	64.798	88.674	0.575
recA	Streptococcus pyogenes NZ131	60.947	93.37	0.569
recA	Streptococcus mitis NCTC 12261	63.077	89.779	0.566
recA	Streptococcus pneumoniae D39	63.863	88.674	0.566
recA	Streptococcus pneumoniae TIGR4	63.863	88.674	0.566
recA	Streptococcus pneumoniae R6	63.863	88.674	0.566
recA	Streptococcus pneumoniae Rx1	63.863	88.674	0.566
recA	Ralstonia pseudosolanacearum GMI1000	65.385	86.188	0.564
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.577	90.055	0.564
recA	Streptococcus mitis SK321	62.769	89.779	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.769	89.779	0.564
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.261	91.989	0.564
recA	Helicobacter pylori 26695	61.231	89.779	0.55
recA	Helicobacter pylori strain NCTC11637	61.231	89.779	0.55
recA	Lactococcus lactis subsp. cremoris KW2	58.702	93.646	0.55