Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | GTQ93_RS03950 | Genome accession | NZ_CP047570 |
| Coordinates | 810049..811107 (+) | Length | 352 a.a. |
| NCBI ID | WP_015571667.1 | Uniprot ID | A0A837F5V8 |
| Organism | Enterobacter hormaechei strain F2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 800329..854136 | 810049..811107 | within | 0 |
Gene organization within MGE regions
Location: 800329..854136
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTQ93_RS03890 (GTQ93_03890) | gutQ | 800329..801294 (-) | 966 | WP_015571677.1 | arabinose-5-phosphate isomerase GutQ | - |
| GTQ93_RS03895 (GTQ93_03895) | - | 801287..802060 (-) | 774 | WP_045907400.1 | DNA-binding transcriptional repressor | - |
| GTQ93_RS03900 (GTQ93_03900) | gutM | 802124..802483 (-) | 360 | WP_017692785.1 | transcriptional regulator GutM | - |
| GTQ93_RS03905 (GTQ93_03905) | srlD | 802575..803354 (-) | 780 | WP_017382786.1 | sorbitol-6-phosphate dehydrogenase | - |
| GTQ93_RS03910 (GTQ93_03910) | srlB | 803369..803731 (-) | 363 | WP_017692786.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| GTQ93_RS03915 (GTQ93_03915) | - | 803744..804703 (-) | 960 | WP_045141877.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| GTQ93_RS03920 (GTQ93_03920) | srlA | 804700..805263 (-) | 564 | WP_015571673.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| GTQ93_RS03925 (GTQ93_03925) | mltB | 805515..806615 (+) | 1101 | WP_015571672.1 | lytic murein transglycosylase B | - |
| GTQ93_RS03930 (GTQ93_03930) | - | 806928..807581 (+) | 654 | WP_058700977.1 | ATP-binding cassette domain-containing protein | - |
| GTQ93_RS03935 (GTQ93_03935) | - | 807578..808438 (+) | 861 | WP_015571669.1 | metal ABC transporter permease | - |
| GTQ93_RS03940 (GTQ93_03940) | - | 808453..809331 (+) | 879 | WP_022649141.1 | metal ABC transporter substrate-binding protein | - |
| GTQ93_RS03945 (GTQ93_03945) | pncC | 809462..809959 (+) | 498 | WP_003862172.1 | nicotinamide-nucleotide amidase | - |
| GTQ93_RS03950 (GTQ93_03950) | recA | 810049..811107 (+) | 1059 | WP_015571667.1 | recombinase RecA | Machinery gene |
| GTQ93_RS03955 (GTQ93_03955) | recX | 811176..811676 (+) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| GTQ93_RS03960 (GTQ93_03960) | alaS | 811808..814435 (+) | 2628 | WP_015571666.1 | alanine--tRNA ligase | - |
| GTQ93_RS03965 (GTQ93_03965) | csrA | 814677..814862 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| GTQ93_RS03990 (GTQ93_03990) | yqaB | 815787..816353 (+) | 567 | WP_015571665.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| GTQ93_RS03995 (GTQ93_03995) | - | 816350..816778 (+) | 429 | WP_017692791.1 | YqaA family protein | - |
| GTQ93_RS04000 (GTQ93_04000) | gshA | 816862..818406 (+) | 1545 | WP_128771939.1 | glutamate--cysteine ligase | - |
| GTQ93_RS04005 (GTQ93_04005) | luxS | 818559..819074 (+) | 516 | WP_017382778.1 | S-ribosylhomocysteine lyase | - |
| GTQ93_RS04010 (GTQ93_04010) | - | 819128..819892 (+) | 765 | WP_003862181.1 | helix-turn-helix transcriptional regulator | - |
| GTQ93_RS04015 (GTQ93_04015) | leuA | 819879..821534 (-) | 1656 | WP_032649278.1 | 2-isopropylmalate synthase | - |
| GTQ93_RS04020 (GTQ93_04020) | emrB | 821719..823266 (-) | 1548 | WP_006811709.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| GTQ93_RS04025 (GTQ93_04025) | emrA | 823283..824455 (-) | 1173 | WP_017382776.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| GTQ93_RS04030 (GTQ93_04030) | emrR | 824586..825116 (-) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| GTQ93_RS04035 (GTQ93_04035) | - | 825431..826615 (-) | 1185 | WP_017692795.1 | MFS transporter | - |
| GTQ93_RS04040 (GTQ93_04040) | proX | 826821..827816 (-) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| GTQ93_RS04045 (GTQ93_04045) | proW | 827826..828890 (-) | 1065 | WP_015571659.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| GTQ93_RS04050 (GTQ93_04050) | proV | 828883..830085 (-) | 1203 | WP_015571658.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| GTQ93_RS04055 (GTQ93_04055) | nrdF | 830419..831378 (-) | 960 | WP_017382773.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| GTQ93_RS04060 (GTQ93_04060) | nrdE | 831388..833532 (-) | 2145 | WP_032669334.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| GTQ93_RS04065 (GTQ93_04065) | nrdI | 833505..833915 (-) | 411 | WP_015571656.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| GTQ93_RS04070 (GTQ93_04070) | nrdH | 833912..834151 (-) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| GTQ93_RS04075 (GTQ93_04075) | - | 834395..834721 (-) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| GTQ93_RS04080 (GTQ93_04080) | - | 834880..835224 (+) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| GTQ93_RS04085 (GTQ93_04085) | alaE | 835257..835706 (-) | 450 | WP_015571653.1 | L-alanine exporter AlaE | - |
| GTQ93_RS04090 (GTQ93_04090) | stpA | 836203..836607 (+) | 405 | WP_015571652.1 | DNA-binding protein StpA | - |
| GTQ93_RS04095 (GTQ93_04095) | - | 836645..836824 (-) | 180 | WP_006811690.1 | hypothetical protein | - |
| GTQ93_RS04100 (GTQ93_04100) | - | 837167..837325 (+) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| GTQ93_RS04105 (GTQ93_04105) | - | 837322..838251 (-) | 930 | WP_015571650.1 | LysR substrate-binding domain-containing protein | - |
| GTQ93_RS04110 (GTQ93_04110) | - | 838572..839177 (+) | 606 | WP_015571649.1 | ankyrin repeat domain-containing protein | - |
| GTQ93_RS04115 (GTQ93_04115) | fdrA | 839286..840827 (+) | 1542 | WP_063157995.1 | acyl-CoA synthetase FdrA | - |
| GTQ93_RS04120 (GTQ93_04120) | - | 840827..842242 (+) | 1416 | WP_201748090.1 | DUF1116 domain-containing protein | - |
| GTQ93_RS04125 (GTQ93_04125) | - | 842254..843834 (+) | 1581 | WP_015571646.1 | hypothetical protein | - |
| GTQ93_RS04130 (GTQ93_04130) | - | 843831..844787 (+) | 957 | WP_017382762.1 | carbamate kinase family protein | - |
| GTQ93_RS04135 (GTQ93_04135) | - | 844789..846168 (+) | 1380 | WP_154123094.1 | amidohydrolase family protein | - |
| GTQ93_RS04140 (GTQ93_04140) | - | 846294..847025 (+) | 732 | WP_017382760.1 | methyltransferase domain-containing protein | - |
| GTQ93_RS04145 (GTQ93_04145) | - | 847022..847624 (-) | 603 | WP_032654728.1 | short chain dehydrogenase | - |
| GTQ93_RS04150 (GTQ93_04150) | - | 847722..848609 (+) | 888 | WP_015571641.1 | LysR family transcriptional regulator | - |
| GTQ93_RS04155 (GTQ93_04155) | - | 848630..849811 (+) | 1182 | WP_032669342.1 | PLP-dependent aminotransferase family protein | - |
| GTQ93_RS04160 (GTQ93_04160) | - | 849838..850203 (-) | 366 | WP_032669343.1 | HigA family addiction module antitoxin | - |
| GTQ93_RS04165 (GTQ93_04165) | - | 850214..850513 (-) | 300 | WP_015571638.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GTQ93_RS04170 (GTQ93_04170) | - | 850764..851963 (-) | 1200 | WP_017382757.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| GTQ93_RS04175 (GTQ93_04175) | - | 851944..854136 (-) | 2193 | WP_017692801.1 | type I secretion system permease/ATPase | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37804.24 Da Isoelectric Point: 4.8095
>NTDB_id=414234 GTQ93_RS03950 WP_015571667.1 810049..811107(+) (recA) [Enterobacter hormaechei strain F2]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLNNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLNNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=414234 GTQ93_RS03950 WP_015571667.1 810049..811107(+) (recA) [Enterobacter hormaechei strain F2]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACTACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCACTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGCGCGGTTGACGTGATCATCGTTGACTCCGTTGCGGCGCTGACGCCAAAAGCGGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTAGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCATGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAACAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACTACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCACTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGCGCGGTTGACGTGATCATCGTTGACTCCGTTGCGGCGCTGACGCCAAAAGCGGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTAGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCATGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAACAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.