Detailed information NTG0041039

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SPHCH_RS08980
• Genome accession: NC_015593
• Coordinates: 1906292..1907365 (-)
• Length: 357 a.a.
• NCBI ID: WP_013847730.1
• Uniprot ID: -
• Organism: Sphingobium chlorophenolicum L-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1901292..1912365

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPHCH_RS08975 (Sphch_1784)	-	1901748..1905950 (+)	4203	WP_013847729.1	translocation/assembly module TamB domain-containing protein	-
SPHCH_RS08980 (Sphch_1785)	recA	1906292..1907365 (-)	1074	WP_013847730.1	recombinase RecA	Machinery gene
SPHCH_RS08985 (Sphch_1786)	-	1907465..1907824 (-)	360	WP_013847731.1	response regulator	-
SPHCH_RS08990 (Sphch_1787)	-	1907913..1910297 (-)	2385	WP_041390848.1	PAS domain-containing sensor histidine kinase	-
SPHCH_RS08995 (Sphch_1788)	-	1910398..1911006 (-)	609	WP_013847733.1	DUF2062 domain-containing protein	-
SPHCH_RS09000 (Sphch_1789)	smpB	1911006..1911488 (-)	483	WP_007683053.1	SsrA-binding protein SmpB	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38336.00 Da
• Isoelectric Point: 5.3668

>NTDB_id=41039 SPHCH_RS08980 WP_013847730.1 1906292..1907365(-) (recA) [Sphingobium chlorophenolicum L-1]
MTAMLSLIDSKKTGTMDRQKALEAALSQIDRAFGKGSAMKLGSREKIEIEAISTGSLGLDIALGIGGLPRGRIIEIYGPE
SSGKTTLALHAIAEAQKTGGIAAFVDAEHALDPGYAKKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDVLVVDSVAA
LVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRT
GQIKDREDIVGNATRVKVVKNKVAPPFKQVEFDIMYGEGVSKIGELLDIGVKTGLVEKSGAWFSYDSVRIGQGRENAKTY
LKEHPEMADKLEKAIRGKTEEVAEGMMAGPEAEDDGE

Nucleotide

• Length: 1074 bp

>NTDB_id=41039 SPHCH_RS08980 WP_013847730.1 1906292..1907365(-) (recA) [Sphingobium chlorophenolicum L-1]
ATGACCGCAATGCTCTCACTCATCGATTCCAAGAAGACAGGGACAATGGACAGACAGAAAGCATTGGAAGCGGCCCTTTC
CCAGATCGACCGTGCCTTTGGCAAAGGTTCGGCGATGAAGCTGGGCAGCCGCGAGAAGATCGAGATCGAGGCGATCTCGA
CCGGATCGCTGGGGCTGGACATCGCGCTCGGCATCGGCGGCCTGCCGCGCGGACGCATTATCGAGATTTATGGACCGGAA
AGTTCGGGCAAGACCACGCTGGCGCTGCATGCCATCGCCGAAGCGCAGAAGACAGGCGGCATCGCGGCCTTCGTGGACGC
GGAACATGCGCTCGATCCCGGTTATGCGAAGAAGTTGGGCGTCGACATCGATGAACTGATCGTGTCGCAGCCGGACACCG
GCGAACAGGCGCTGGAGATCGTCGACACGCTGGTGCGATCGAACGCTATCGACGTGCTGGTGGTCGACTCGGTCGCCGCA
CTGGTGCCGCGGGCGGAAATTGAGGGCGAAATGGGCGACAGCCATGTCGGCCTGCAAGCCCGCCTGATGAGCCAGGCGCT
GCGCAAGCTGACCGGGTCGATCTCGCGTTCCAAGTGCATGGTGATCTTCATCAACCAGGTGCGCATGAAGATCGGCGTGA
TGTACGGCAATCCGGAAACGACGACCGGCGGCAATGCGCTCAAATTCTATGCGTCCGTCCGTCTCGACATCCGCCGCACG
GGCCAGATCAAGGACCGCGAGGACATCGTCGGCAACGCGACCCGCGTGAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTT
CAAGCAGGTCGAATTCGACATCATGTATGGCGAGGGCGTGTCCAAGATCGGCGAACTGCTCGACATCGGCGTGAAGACCG
GGCTGGTTGAGAAGTCGGGCGCCTGGTTCTCCTATGACTCGGTCCGCATCGGCCAGGGTCGGGAAAATGCGAAAACCTAT
CTGAAAGAACATCCCGAAATGGCGGATAAGCTGGAGAAGGCGATCCGCGGCAAGACCGAGGAAGTCGCCGAAGGGATGAT
GGCCGGACCCGAAGCGGAGGATGATGGCGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (20-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	67.544	95.798	0.647
recA	Neisseria gonorrhoeae strain FA1090	67.544	95.798	0.647
recA	Neisseria gonorrhoeae MS11	67.544	95.798	0.647
recA	Pseudomonas stutzeri DSM 10701	67.751	94.678	0.641
recA	Glaesserella parasuis strain SC1401	70.533	89.356	0.63
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.312	89.636	0.63
recA	Vibrio cholerae strain A1552	70.312	89.636	0.63
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.497	95.798	0.627
recA	Acinetobacter baumannii D1279779	68.438	89.636	0.613
recA	Streptococcus pneumoniae R6	63.663	96.359	0.613
recA	Streptococcus pneumoniae Rx1	63.663	96.359	0.613
recA	Streptococcus pneumoniae D39	63.663	96.359	0.613
recA	Streptococcus pneumoniae TIGR4	63.663	96.359	0.613
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.061	92.437	0.611
recA	Acinetobacter baylyi ADP1	68.125	89.636	0.611
recA	Streptococcus mitis NCTC 12261	62.791	96.359	0.605
recA	Streptococcus mitis SK321	62.248	97.199	0.605
recA	Ralstonia pseudosolanacearum GMI1000	65.152	92.437	0.602
recA	Bacillus subtilis subsp. subtilis str. 168	67.188	89.636	0.602
recA	Helicobacter pylori strain NCTC11637	65.152	92.437	0.602
recA	Helicobacter pylori 26695	64.848	92.437	0.599
recA	Streptococcus pyogenes NZ131	63.063	93.277	0.588
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.048	92.997	0.577
recA	Latilactobacillus sakei subsp. sakei 23K	64.062	89.636	0.574
recA	Lactococcus lactis subsp. cremoris KW2	61.027	92.717	0.566
recA	Streptococcus mutans UA159	60.725	92.717	0.563