Detailed information NTG0040464

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: B565_RS18305
• Genome accession: NC_015424
• Coordinates: 4053889..4054953 (-)
• Length: 354 a.a.
• NCBI ID: WP_005348744.1
• Uniprot ID: A0A0K0MIY5
• Organism: Aeromonas veronii B565
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4048889..4059953

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B565_RS18290 (B565_3601)	-	4049160..4050398 (-)	1239	WP_005336054.1	aspartate kinase	-
B565_RS18295 (B565_3602)	alaS	4050415..4053039 (-)	2625	WP_005343004.1	alanine--tRNA ligase	-
B565_RS18300 (B565_3603)	-	4053335..4053844 (-)	510	WP_041915452.1	regulatory protein RecX	-
B565_RS18305 (B565_3604)	recA	4053889..4054953 (-)	1065	WP_005348744.1	recombinase RecA	Machinery gene
B565_RS18310 (B565_3605)	pncC	4055034..4055525 (-)	492	WP_005348742.1	nicotinamide-nucleotide amidase	-
B565_RS18315 (B565_3606)	mutS	4055776..4058367 (+)	2592	WP_013724150.1	DNA mismatch repair protein MutS	-
B565_RS18320 (B565_3607)	-	4058454..4059314 (-)	861	WP_005348739.1	patatin-like phospholipase family protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37989.67 Da
• Isoelectric Point: 4.8874

>NTDB_id=40464 B565_RS18305 WP_005348744.1 4053889..4054953(-) (recA) [Aeromonas veronii B565]
MDQNKQKALAAALGQIEKQFGKGSIMRLGDSKTMDIEAISTGSLSLDVALGIGGLPCGRIVEIYGPESSGKTTLTLQVIA
EAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKNANCLCIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGNE
TRVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGKANVMKLFAENKVMAGEVEA
RLRELLLSGAVPVDDKAAPVEADEFDAESEQEFE

Nucleotide

• Length: 1065 bp

>NTDB_id=40464 B565_RS18305 WP_005348744.1 4053889..4054953(-) (recA) [Aeromonas veronii B565]
ATGGATCAGAACAAACAGAAGGCACTGGCGGCTGCGCTGGGTCAGATTGAAAAGCAGTTCGGCAAAGGTTCCATCATGCG
TCTGGGCGACAGCAAGACCATGGATATCGAAGCCATCTCTACCGGTTCCCTCTCGCTGGACGTGGCGCTGGGCATTGGCG
GTCTGCCGTGTGGCCGTATCGTCGAAATCTACGGCCCGGAATCTTCCGGTAAAACAACCCTCACCCTGCAGGTGATCGCG
GAAGCCCAGAAGAAAGGCAAAACCTGTGCCTTCGTCGATGCGGAACACGCTCTCGACCCTATCTACGCTGCCAAGCTGGG
CGTCAACGTCGACGACCTGCTCATCTCCCAGCCGGATACCGGCGAACAGGCGCTGGAAATCTGCGACATGCTGGTTCGCT
CCAACGCCGTTGACGTCATCATCGTCGACTCCGTGGCGGCTCTGACCCCGAAAGCGGAAATCGAAGGTGAGATGGGTGAC
TCCCACGTTGGTCTGCAGGCCCGTCTGATGTCCCAGGCACTGCGCAAGCTGACCGCCAACATCAAGAACGCCAACTGCCT
GTGCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCATGTTCGGTAGCCCGGAGACCACCACAGGTGGTAACGCGC
TCAAGTTCTACGCCTCCGTGCGTCTGGATATCCGTCGTATCGGCGCCATCAAGGAAGGCGACGAAGTGGTCGGTAACGAG
ACCCGCGTCAAAGTGGTCAAGAACAAGGTGGCCCCGCCCTTCAAGCAGGCTGAATTCCAGATCTTCTACGGCGCCGGTAT
CTCCAAAGAGGGCGAGCTGGTGGATCTCGGTGTCAAGCACAAGCTGATCGACAAGGCCGGTGCCTGGTACAGCTACAACG
GCGAGAAGATCGGTCAGGGCAAGGCCAACGTCATGAAGCTGTTCGCCGAGAACAAGGTGATGGCTGGCGAAGTGGAAGCC
CGCCTGCGCGAGCTGCTGCTCTCCGGTGCCGTGCCAGTCGATGACAAGGCTGCACCGGTTGAGGCAGACGAGTTCGATGC
CGAAAGCGAACAAGAGTTCGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A0K0MIY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	77.011	98.305	0.757
recA	Vibrio cholerae strain A1552	78.659	92.655	0.729
recA	Vibrio cholerae O1 biovar El Tor strain E7946	78.659	92.655	0.729
recA	Acinetobacter baumannii D1279779	72.886	96.893	0.706
recA	Acinetobacter baylyi ADP1	72.384	97.175	0.703
recA	Glaesserella parasuis strain SC1401	70.538	99.718	0.703
recA	Ralstonia pseudosolanacearum GMI1000	74.214	89.831	0.667
recA	Neisseria gonorrhoeae MS11	71.779	92.09	0.661
recA	Neisseria gonorrhoeae MS11	71.779	92.09	0.661
recA	Neisseria gonorrhoeae strain FA1090	71.779	92.09	0.661
recA	Helicobacter pylori strain NCTC11637	61.628	97.175	0.599
recA	Helicobacter pylori 26695	61.047	97.175	0.593
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.444	93.503	0.593
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.517	90.113	0.59
recA	Latilactobacillus sakei subsp. sakei 23K	60	96.045	0.576
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	90.678	0.573
recA	Streptococcus pneumoniae Rx1	61.61	91.243	0.562
recA	Streptococcus pneumoniae D39	61.61	91.243	0.562
recA	Streptococcus pneumoniae R6	61.61	91.243	0.562
recA	Streptococcus pneumoniae TIGR4	61.61	91.243	0.562
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.366	92.655	0.559
recA	Streptococcus mitis SK321	61.3	91.243	0.559
recA	Streptococcus mitis NCTC 12261	61.3	91.243	0.559
recA	Streptococcus mutans UA159	60.372	91.243	0.551
recA	Streptococcus pyogenes NZ131	60.062	91.243	0.548
recA	Lactococcus lactis subsp. cremoris KW2	57.895	91.243	0.528