Detailed information NTG0402518

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FOC36_RS11470
• Genome accession: NZ_CP046307
• Coordinates: 2423715..2424761 (+)
• Length: 348 a.a.
• NCBI ID: WP_003128984.1
• Uniprot ID: A0A4V0C8B6
• Organism: Enterococcus gallinarum strain FDAARGOS_728
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2424927..2426117	2423715..2424761	flank	166

Gene organization within MGE regions

Location: 2423715..2426117

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC36_RS11470 (FOC36_11470)	recA	2423715..2424761 (+)	1047	WP_003128984.1	recombinase RecA	Machinery gene
FOC36_RS11475 (FOC36_11475)	-	2424927..2426117 (-)	1191	WP_155853267.1	IS256-like element ISLgar5 family transposase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37518.71 Da
• Isoelectric Point: 4.8221

>NTDB_id=402518 FOC36_RS11470 WP_003128984.1 2423715..2424761(+) (recA) [Enterococcus gallinarum strain FDAARGOS_728]
MADDRKAALDAALKKIEKNYGKGAIMKLGEKVDQQISTIPSGSLALDVALGVGGYPRGRIVEVYGPESSGKTTVALHAIA
EVQKGGGTAAFIDAEHALDPQYAQKLGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDIVVIDSVAALVPRAEIDGEMGD
THVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGIMFGNPETTPGGRALKFYSTIRLEVRRAEQLKSGTDIIGNR
TKIKVVKNKVAPPFKVAEVDMMYGQGISQEGELLDMAVEQDIVDKSGAWYAYKGDRIGQGRENAKNYMREHQEMMMEVSA
RVRDAYGIGTGETVIETEDAQEELPLDE

Nucleotide

• Length: 1047 bp

>NTDB_id=402518 FOC36_RS11470 WP_003128984.1 2423715..2424761(+) (recA) [Enterococcus gallinarum strain FDAARGOS_728]
TTGGCAGATGATCGTAAAGCAGCTTTAGATGCTGCACTGAAAAAGATTGAAAAGAACTATGGTAAGGGTGCCATTATGAA
ACTTGGTGAGAAAGTCGATCAACAAATTTCGACGATTCCAAGTGGTTCATTGGCTTTGGATGTTGCTTTAGGTGTGGGTG
GTTATCCACGTGGACGTATTGTTGAAGTATATGGACCAGAAAGTTCTGGTAAAACCACAGTTGCTTTACACGCAATCGCT
GAAGTTCAAAAAGGTGGCGGAACAGCAGCCTTTATTGATGCAGAACATGCATTAGATCCTCAATATGCACAAAAATTGGG
TGTAAATATCGATGATTTGCTGCTATCTCAGCCCGATACAGGTGAGCAAGGTCTTGAGATCGCTGATGCTTTAGTATCAA
GTGGAGCTGTCGATATTGTTGTTATCGACTCGGTTGCCGCTTTGGTACCAAGAGCTGAGATCGATGGTGAGATGGGTGAT
ACCCACGTTGGTCTTCAAGCCCGGTTGATGTCTCAAGCATTGCGTAAATTATCTGGATCAATCAATAAGACCAAAACAAT
TGCGATTTTTATCAATCAAATTCGTGAAAAAGTTGGGATCATGTTCGGTAATCCTGAAACAACTCCTGGTGGACGTGCGC
TTAAATTCTATTCGACGATTCGATTAGAGGTACGACGTGCAGAACAATTAAAATCCGGAACAGACATTATCGGAAACCGG
ACAAAAATCAAAGTTGTCAAAAATAAAGTAGCGCCACCTTTTAAAGTTGCTGAAGTAGACATGATGTATGGACAAGGAAT
CTCTCAAGAGGGAGAGTTGCTTGATATGGCAGTAGAGCAAGACATTGTTGATAAGAGCGGTGCTTGGTATGCTTATAAAG
GAGATCGCATTGGTCAGGGGCGGGAAAACGCGAAAAACTATATGCGTGAACATCAAGAAATGATGATGGAAGTTTCTGCT
CGTGTTCGCGATGCGTACGGCATTGGTACCGGAGAAACGGTCATTGAAACAGAAGATGCGCAAGAAGAACTACCATTAGA
CGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-268)

3D structure

• AlphaFold DB: A0A4V0C8B6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	79.765	97.989	0.782
recA	Bacillus subtilis subsp. subtilis str. 168	77.538	93.391	0.724
recA	Streptococcus pneumoniae D39	65.556	100	0.678
recA	Streptococcus pneumoniae R6	65.556	100	0.678
recA	Streptococcus pneumoniae TIGR4	65.556	100	0.678
recA	Streptococcus pneumoniae Rx1	65.556	100	0.678
recA	Streptococcus mitis NCTC 12261	65.73	100	0.672
recA	Streptococcus mitis SK321	64.888	100	0.664
recA	Streptococcus mutans UA159	66.379	100	0.664
recA	Streptococcus pyogenes NZ131	68.58	95.115	0.652
recA	Lactococcus lactis subsp. cremoris KW2	68.389	94.54	0.647
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.918	94.54	0.595
recA	Neisseria gonorrhoeae MS11	61.702	94.54	0.583
recA	Neisseria gonorrhoeae MS11	61.702	94.54	0.583
recA	Neisseria gonorrhoeae strain FA1090	61.702	94.54	0.583
recA	Ralstonia pseudosolanacearum GMI1000	61.585	94.253	0.58
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.79	94.54	0.575
recA	Acinetobacter baumannii D1279779	58.187	98.276	0.572
recA	Acinetobacter baylyi ADP1	61.111	93.103	0.569
recA	Pseudomonas stutzeri DSM 10701	61.3	92.816	0.569
recA	Helicobacter pylori 26695	56.772	99.713	0.566
recA	Helicobacter pylori strain NCTC11637	56.772	99.713	0.566
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.185	93.103	0.56
recA	Vibrio cholerae strain A1552	60.185	93.103	0.56
recA	Glaesserella parasuis strain SC1401	59.938	92.529	0.555
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.077	93.391	0.552