Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   SALIVA_RS00330 Genome accession   NC_017595
Coordinates   57914..58351 (-) Length   145 a.a.
NCBI ID   WP_014633775.1    Uniprot ID   -
Organism   Streptococcus salivarius JIM8777     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 52914..63351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVA_RS00310 (SALIVA_0060) argR 54090..54518 (+) 429 WP_171963651.1 arginine repressor -
  SALIVA_RS00315 (SALIVA_0061) - 54518..54877 (+) 360 WP_002889586.1 YlbF family regulator -
  SALIVA_RS00320 (SALIVA_0062) hexA 54897..57428 (+) 2532 WP_371748909.1 DNA mismatch repair protein MutS Machinery gene
  SALIVA_RS00325 (SALIVA_0063) - 57462..57917 (-) 456 WP_014633774.1 DUF3021 domain-containing protein -
  SALIVA_RS00330 (SALIVA_0064) brsR 57914..58351 (-) 438 WP_014633775.1 LytTR family DNA-binding domain-containing protein Regulator
  SALIVA_RS00335 (SALIVA_0065) - 58530..58835 (+) 306 WP_002886319.1 hypothetical protein -
  SALIVA_RS00340 (SALIVA_0066) hexB 58885..60828 (+) 1944 WP_014633776.1 DNA mismatch repair endonuclease MutL Machinery gene
  SALIVA_RS00345 (SALIVA_0067) - 60959..61180 (+) 222 WP_002886321.1 hypothetical protein -
  SALIVA_RS00350 (SALIVA_0068) ruvA 61338..61928 (+) 591 WP_002886323.1 Holliday junction branch migration protein RuvA Machinery gene
  SALIVA_RS00355 (SALIVA_0069) - 61937..62491 (+) 555 WP_002886325.1 DNA-3-methyladenine glycosylase I -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 17061.66 Da        Isoelectric Point: 9.1546

>NTDB_id=40241 SALIVA_RS00330 WP_014633775.1 57914..58351(-) (brsR) [Streptococcus salivarius JIM8777]
MKIKVQIDSVFQEEMLQIQAPSRTPKIQQVVEFVESLDDNQRLKGKKDGETYFIESNAISRIYIENRQVLAETIQGEYHL
GLRLYQVLEKLPSYFIKISQSEIVNLKEIERFNITPNGLVEIHLKNKETTYSSRRYLKAIKEKLQ

Nucleotide


Download         Length: 438 bp        

>NTDB_id=40241 SALIVA_RS00330 WP_014633775.1 57914..58351(-) (brsR) [Streptococcus salivarius JIM8777]
ATGAAAATAAAAGTTCAGATTGACTCGGTATTTCAAGAAGAAATGTTGCAGATTCAGGCACCTAGTCGGACGCCCAAGAT
TCAGCAAGTGGTCGAGTTTGTCGAAAGTTTGGATGATAACCAACGACTCAAAGGAAAAAAAGATGGCGAAACTTATTTCA
TCGAGTCTAATGCTATTTCCAGAATCTACATCGAAAATCGTCAAGTTCTAGCTGAAACTATTCAAGGAGAGTACCACTTA
GGCTTACGTCTCTATCAAGTTTTAGAAAAACTGCCATCTTACTTTATCAAAATCTCACAATCAGAGATTGTCAACCTCAA
AGAAATTGAACGCTTCAACATTACCCCTAACGGCCTCGTTGAAATTCACCTTAAAAACAAGGAAACCACCTACTCATCAC
GCCGTTACCTCAAAGCAATAAAGGAGAAATTACAATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.806

99.31

0.366

Multiple sequence alignment