Detailed information NTG0402007

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GL174_RS10145
• Genome accession: NZ_CP046252
• Coordinates: 2109240..2110313 (-)
• Length: 357 a.a.
• NCBI ID: WP_155182257.1
• Uniprot ID: A0A6I5YKW8
• Organism: Sphingobium sp. CAP-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2104240..2115313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL174_RS10140 (GL174_10140)	-	2108106..2108894 (-)	789	WP_155182253.1	transglutaminase family protein	-
GL174_RS10145 (GL174_10145)	recA	2109240..2110313 (-)	1074	WP_155182257.1	recombinase RecA	Machinery gene
GL174_RS10150 (GL174_10150)	-	2110436..2110792 (-)	357	WP_155182260.1	response regulator	-
GL174_RS10155 (GL174_10155)	-	2110991..2111629 (-)	639	WP_155182262.1	hypothetical protein	-
GL174_RS10160 (GL174_10160)	-	2111830..2114217 (-)	2388	WP_155184936.1	response regulator	-
GL174_RS10165 (GL174_10165)	-	2114278..2114871 (-)	594	WP_155182264.1	DUF2062 domain-containing protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38326.98 Da
• Isoelectric Point: 5.5611

>NTDB_id=402007 GL174_RS10145 WP_155182257.1 2109240..2110313(-) (recA) [Sphingobium sp. CAP-1]
MTALLSLIDSKKTGNMDRQKALDAALAQIDRAFGKGSAMKLGSREKLEIEAISTGSLGLDIALGIGGLPKGRIIEVYGPE
SSGKTTLALHAIAEAQKAGGTAAFVDAEHALDPAYAKKLGVDIDELIVSQPDTGEQALEIVDTLVRSNAIDILVVDSVAA
LVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRI
GQIKDRDDIVGNTTKVKVVKNKVAPPFKQVEFDIMYGEGISKIGELLDIGVKAGLVEKSGAWFSYDSVRVGQGRENSKNF
LREHPEMAEKLERAIRAQTEKVAEGMMTGPDAEDDGE

Nucleotide

• Length: 1074 bp

>NTDB_id=402007 GL174_RS10145 WP_155182257.1 2109240..2110313(-) (recA) [Sphingobium sp. CAP-1]
ATGACTGCACTGCTCTCACTCATCGATTCCAAAAAGACGGGAAACATGGACAGACAGAAAGCATTGGACGCCGCGCTGGC
GCAGATCGATCGCGCCTTTGGCAAGGGGTCGGCGATGAAGCTGGGCAGCCGGGAAAAGCTGGAGATTGAGGCGATCTCGA
CCGGCTCGCTCGGCCTCGACATCGCGCTCGGCATTGGCGGCCTGCCCAAGGGGCGGATCATCGAAGTCTATGGCCCGGAA
AGTTCGGGCAAGACCACGCTGGCGCTGCACGCCATCGCCGAAGCGCAGAAGGCCGGCGGCACCGCCGCCTTTGTCGACGC
CGAACATGCGCTCGACCCGGCCTATGCCAAGAAGCTGGGCGTCGATATTGACGAACTGATCGTGTCGCAGCCCGACACCG
GCGAACAGGCGCTGGAGATTGTCGACACGCTGGTCCGTTCCAACGCCATCGACATTCTCGTGGTCGACTCGGTCGCCGCG
CTGGTGCCCCGCGCCGAAATCGAGGGCGAGATGGGCGACAGCCATGTCGGCCTTCAGGCGCGCCTCATGTCCCAGGCGCT
GCGCAAGCTGACCGGCTCGATCTCGCGCTCCAAATGCATGGTGATCTTCATCAACCAGGTGCGGATGAAGATCGGCGTGA
TGTATGGCAACCCGGAAACCACGACCGGCGGCAATGCGCTCAAATTCTACGCCTCGGTGCGTCTCGACATCCGCCGTATC
GGTCAGATCAAGGATCGGGATGATATTGTCGGCAACACGACCAAGGTGAAGGTGGTCAAGAACAAGGTCGCCCCGCCCTT
CAAGCAGGTCGAATTCGACATCATGTATGGCGAGGGCATTTCCAAGATCGGCGAACTGCTCGACATCGGCGTCAAGGCCG
GACTGGTCGAAAAGTCCGGCGCCTGGTTCTCCTATGACTCGGTCCGCGTCGGCCAGGGTCGCGAAAATTCGAAGAATTTC
CTGCGCGAGCATCCCGAAATGGCGGAAAAGCTCGAACGGGCCATCCGCGCGCAGACCGAGAAGGTCGCCGAAGGGATGAT
GACCGGACCCGATGCGGAGGATGATGGCGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (20-281)

3D structure

• AlphaFold DB: A0A6I5YKW8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae strain FA1090	66.082	95.798	0.633
recA	Neisseria gonorrhoeae MS11	66.082	95.798	0.633
recA	Neisseria gonorrhoeae MS11	66.082	95.798	0.633
recA	Pseudomonas stutzeri DSM 10701	66.568	94.678	0.63
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.789	95.798	0.63
recA	Glaesserella parasuis strain SC1401	70.219	89.356	0.627
recA	Acinetobacter baumannii D1279779	69.255	90.196	0.625
recA	Acinetobacter baylyi ADP1	68.323	90.196	0.616
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.964	92.997	0.613
recA	Bacillus subtilis subsp. subtilis str. 168	68.125	89.636	0.611
recA	Vibrio cholerae O1 biovar El Tor strain E7946	67.5	89.636	0.605
recA	Vibrio cholerae strain A1552	67.5	89.636	0.605
recA	Helicobacter pylori strain NCTC11637	63.988	94.118	0.602
recA	Helicobacter pylori 26695	63.69	94.118	0.599
recA	Ralstonia pseudosolanacearum GMI1000	68.831	86.275	0.594
recA	Streptococcus pneumoniae TIGR4	63.063	93.277	0.588
recA	Streptococcus pneumoniae Rx1	63.063	93.277	0.588
recA	Streptococcus pneumoniae D39	63.063	93.277	0.588
recA	Streptococcus pneumoniae R6	63.063	93.277	0.588
recA	Streptococcus mitis NCTC 12261	63.063	93.277	0.588
recA	Streptococcus mitis SK321	63.063	93.277	0.588
recA	Streptococcus pyogenes NZ131	62.162	93.277	0.58
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.562	93.277	0.574
recA	Streptococcus mutans UA159	61.261	93.277	0.571
recA	Latilactobacillus sakei subsp. sakei 23K	63.551	89.916	0.571
recA	Lactococcus lactis subsp. cremoris KW2	60.542	92.997	0.563