Detailed information NTG0401730

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GGC03_RS02000
• Genome accession: NZ_CP046162
• Coordinates: 436602..437648 (+)
• Length: 348 a.a.
• NCBI ID: WP_031343405.1
• Uniprot ID: A0A097QPW4
• Organism: Vibrio sp. THAF191c
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 431602..442648

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GGC03_RS01985 (GGC03_02000)	lptG	432146..433216 (+)	1071	WP_006963120.1	LPS export ABC transporter permease LptG	-
GGC03_RS01990 (GGC03_02005)	mutS	433269..435833 (-)	2565	WP_006963119.1	DNA mismatch repair protein MutS	-
GGC03_RS01995 (GGC03_02010)	pncC	435918..436421 (+)	504	WP_006963118.1	nicotinamide-nucleotide amidase	-
GGC03_RS02000 (GGC03_02015)	recA	436602..437648 (+)	1047	WP_031343405.1	recombinase RecA	Machinery gene
GGC03_RS02005 (GGC03_02020)	recX	437733..438197 (+)	465	WP_006963116.1	recombination regulator RecX	-
GGC03_RS02010 (GGC03_02025)	alaS	438340..440922 (+)	2583	WP_152471951.1	alanine--tRNA ligase	-
GGC03_RS02015 (GGC03_02030)	-	441117..442304 (+)	1188	WP_006963115.1	aspartate kinase	-
GGC03_RS02020 (GGC03_02035)	csrA	442397..442594 (+)	198	WP_006963114.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37454.91 Da
• Isoelectric Point: 4.8016

>NTDB_id=401730 GGC03_RS02000 WP_031343405.1 436602..437648(+) (recA) [Vibrio sp. THAF191c]
MDDNKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKQAETQIMYGAGFNREGELIDLGVKNKLVEKAGAWYSYNGDKIGQGKANACKYLRENPAAAQQIDT
KLRELLLTPAEIQPDDAELGEMPEQEEL

Nucleotide

• Length: 1047 bp

>NTDB_id=401730 GGC03_RS02000 WP_031343405.1 436602..437648(+) (recA) [Vibrio sp. THAF191c]
ATGGACGATAACAAACAGAAAGCGCTCGCCGCTGCGCTCGGTCAGATTGAAAAGCAATTCGGTAAAGGCTCTATTATGCG
TCTTGGTGATAACCGCGCTATGGATGTTGAAACCATCTCAACAGGTTCACTTTCTCTTGATATCGCATTGGGTGCTGGTG
GTCTGCCAATGGGTCGTATCGTTGAAGTGTATGGCCCAGAGTCATCAGGTAAGACGACACTAACTCTTGAGCTGATTGCT
GCTGCACAACGTGAAGGTAAAACATGTGCCTTTATTGATGCAGAACACGCTCTTGATCCTGTCTACGCTAAGAAGCTAGG
TGTAGATATTGATGCACTATTGGTTTCTCAGCCGGATACGGGTGAGCAAGCGTTAGAAATCTGTGACGCTCTGGCGCGCT
CAGGTGCGATTGACGTTATGGTTGTCGACTCTGTGGCTGCATTGACACCGAAAGCGGAAATCGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTTCAGGCGCGTATGCTTTCTCAGGCAATGCGTAAGCTGACAGGTAACCTGAAGCAGTCAAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCTGAAACGACCACAGGTGGTAATGCAC
TAAAATTCTACGCTTCTGTTCGTCTTGATATCCGCCGCACAGGCTCTATCAAGGAAGGCGACGAAGTGGTGGGTAACGAA
ACTCGCATTAAAGTGGTTAAGAACAAGATCGCAGCACCGTTTAAACAAGCTGAAACGCAAATCATGTACGGCGCGGGCTT
TAACCGTGAAGGTGAGCTGATTGACCTGGGCGTGAAGAATAAGTTGGTTGAAAAAGCGGGCGCTTGGTATAGCTACAATG
GCGATAAGATTGGCCAAGGTAAAGCAAATGCATGCAAGTACCTACGTGAAAACCCAGCGGCGGCTCAGCAAATCGATACG
AAATTGCGTGAGTTGTTGCTAACACCGGCAGAAATCCAGCCAGACGACGCTGAGCTAGGTGAAATGCCAGAGCAAGAAGA
GCTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A097QPW4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	88.385	100	0.897
recA	Vibrio cholerae O1 biovar El Tor strain E7946	88.385	100	0.897
recA	Pseudomonas stutzeri DSM 10701	74.924	95.115	0.713
recA	Acinetobacter baumannii D1279779	72.141	97.989	0.707
recA	Acinetobacter baylyi ADP1	73.874	95.69	0.707
recA	Neisseria gonorrhoeae MS11	67.241	100	0.672
recA	Neisseria gonorrhoeae MS11	67.241	100	0.672
recA	Neisseria gonorrhoeae strain FA1090	67.241	100	0.672
recA	Glaesserella parasuis strain SC1401	66.193	100	0.67
recA	Ralstonia pseudosolanacearum GMI1000	71.111	90.517	0.644
recA	Helicobacter pylori 26695	60.756	98.851	0.601
recA	Helicobacter pylori strain NCTC11637	60.465	98.851	0.598
recA	Streptococcus pneumoniae TIGR4	58.857	100	0.592
recA	Streptococcus pneumoniae Rx1	58.857	100	0.592
recA	Streptococcus pneumoniae D39	58.857	100	0.592
recA	Streptococcus pneumoniae R6	58.857	100	0.592
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.95	91.667	0.586
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	92.241	0.583
recA	Streptococcus pyogenes NZ131	61.231	93.391	0.572
recA	Streptococcus mitis SK321	61.3	92.816	0.569
recA	Streptococcus mitis NCTC 12261	61.3	92.816	0.569
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.517	95.115	0.566
recA	Streptococcus mutans UA159	60.615	93.391	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.442	91.667	0.563
recA	Latilactobacillus sakei subsp. sakei 23K	60.125	92.241	0.555
recA	Lactococcus lactis subsp. cremoris KW2	59.752	92.816	0.555