Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | GJ664_RS06440 | Genome accession | NZ_CP046037 |
| Coordinates | 1302255..1303322 (+) | Length | 355 a.a. |
| NCBI ID | WP_011374196.1 | Uniprot ID | A0A094Y0D2 |
| Organism | Latilactobacillus sakei strain CBA3614 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1285405..1336738 | 1302255..1303322 | within | 0 |
Gene organization within MGE regions
Location: 1285405..1336738
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJ664_RS06365 (GJ664_06365) | - | 1286820..1287845 (-) | 1026 | WP_025016338.1 | lactonase family protein | - |
| GJ664_RS06370 (GJ664_06370) | - | 1287994..1288383 (+) | 390 | WP_049762106.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| GJ664_RS06375 (GJ664_06375) | - | 1288399..1289538 (+) | 1140 | WP_154255252.1 | AI-2E family transporter | - |
| GJ664_RS06380 (GJ664_06380) | - | 1289671..1290108 (-) | 438 | WP_025016336.1 | GNAT family N-acetyltransferase | - |
| GJ664_RS06385 (GJ664_06385) | - | 1290272..1291249 (-) | 978 | WP_011374185.1 | GMP reductase | - |
| GJ664_RS06390 (GJ664_06390) | - | 1291396..1292349 (-) | 954 | WP_011374186.1 | magnesium transporter CorA family protein | - |
| GJ664_RS06395 (GJ664_06395) | - | 1292438..1293274 (+) | 837 | WP_016264719.1 | methyltransferase domain-containing protein | - |
| GJ664_RS06400 (GJ664_06400) | trmL | 1293527..1294036 (+) | 510 | WP_011374188.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| GJ664_RS06405 (GJ664_06405) | - | 1294048..1294455 (+) | 408 | WP_025016334.1 | DUF1149 family protein | - |
| GJ664_RS06410 (GJ664_06410) | - | 1294594..1296963 (+) | 2370 | WP_094365641.1 | FtsK/SpoIIIE family DNA translocase | - |
| GJ664_RS06415 (GJ664_06415) | yfmF | 1297161..1298432 (+) | 1272 | WP_011374191.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| GJ664_RS06420 (GJ664_06420) | yfmH | 1298422..1299726 (+) | 1305 | WP_025016333.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| GJ664_RS06425 (GJ664_06425) | ymfI | 1299726..1300457 (+) | 732 | WP_025016332.1 | elongation factor P 5-aminopentanone reductase | - |
| GJ664_RS06430 (GJ664_06430) | - | 1300539..1301462 (+) | 924 | WP_011374194.1 | helix-turn-helix domain-containing protein | - |
| GJ664_RS06435 (GJ664_06435) | pgsA | 1301488..1302072 (+) | 585 | WP_011374195.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| GJ664_RS06440 (GJ664_06440) | recA | 1302255..1303322 (+) | 1068 | WP_011374196.1 | recombinase RecA | Machinery gene |
| GJ664_RS06445 (GJ664_06445) | rny | 1303709..1305274 (+) | 1566 | WP_011374197.1 | ribonuclease Y | - |
| GJ664_RS06450 (GJ664_06450) | - | 1305430..1306518 (+) | 1089 | WP_035144637.1 | glycosyltransferase family 4 protein | - |
| GJ664_RS06455 (GJ664_06455) | - | 1306545..1307210 (-) | 666 | WP_025016329.1 | YigZ family protein | - |
| GJ664_RS06460 (GJ664_06460) | comFA | 1307272..1308609 (+) | 1338 | WP_052039239.1 | DEAD/DEAH box helicase | Machinery gene |
| GJ664_RS06465 (GJ664_06465) | comFC | 1308852..1309280 (+) | 429 | WP_154255254.1 | ComF family protein | Machinery gene |
| GJ664_RS06470 (GJ664_06470) | hpf | 1309407..1309952 (+) | 546 | WP_011374202.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| GJ664_RS06475 (GJ664_06475) | secA | 1310201..1312564 (+) | 2364 | WP_011374203.1 | preprotein translocase subunit SecA | - |
| GJ664_RS06480 (GJ664_06480) | prfB | 1312634..1313750 (+) | 1117 | WP_099049013.1 | peptide chain release factor 2 | - |
| GJ664_RS06485 (GJ664_06485) | ftsE | 1313881..1314567 (+) | 687 | WP_011374205.1 | cell division ATP-binding protein FtsE | - |
| GJ664_RS06490 (GJ664_06490) | ftsX | 1314557..1315444 (+) | 888 | WP_016264727.1 | permease-like cell division protein FtsX | - |
| GJ664_RS06495 (GJ664_06495) | - | 1315638..1316771 (+) | 1134 | WP_094365643.1 | PDZ domain-containing protein | - |
| GJ664_RS06500 (GJ664_06500) | - | 1316791..1317504 (+) | 714 | WP_094365644.1 | response regulator transcription factor | - |
| GJ664_RS06505 (GJ664_06505) | pnpS | 1317491..1319152 (+) | 1662 | WP_094365645.1 | two-component system histidine kinase PnpS | - |
| GJ664_RS06510 (GJ664_06510) | - | 1319245..1320105 (+) | 861 | WP_011374210.1 | phosphate ABC transporter substrate-binding protein PstS family protein | - |
| GJ664_RS06515 (GJ664_06515) | pstC | 1320115..1321038 (+) | 924 | WP_011374211.1 | phosphate ABC transporter permease subunit PstC | - |
| GJ664_RS06520 (GJ664_06520) | pstA | 1321038..1321922 (+) | 885 | WP_016264731.1 | phosphate ABC transporter permease PstA | - |
| GJ664_RS06525 (GJ664_06525) | pstB | 1321932..1322741 (+) | 810 | WP_011374213.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| GJ664_RS06530 (GJ664_06530) | pstB | 1322762..1323520 (+) | 759 | WP_011374214.1 | phosphate ABC transporter ATP-binding protein PstB | - |
| GJ664_RS06535 (GJ664_06535) | phoU | 1323537..1324214 (+) | 678 | WP_011374215.1 | phosphate signaling complex protein PhoU | - |
| GJ664_RS06540 (GJ664_06540) | - | 1324433..1325362 (+) | 930 | WP_094365647.1 | IS30-like element ISLpl1 family transposase | - |
| GJ664_RS06545 (GJ664_06545) | - | 1325475..1325945 (+) | 471 | WP_094365648.1 | nucleoside 2-deoxyribosyltransferase | - |
| GJ664_RS06550 (GJ664_06550) | - | 1326135..1327322 (+) | 1188 | WP_094365649.1 | glycine C-acetyltransferase | - |
| GJ664_RS06555 (GJ664_06555) | - | 1327342..1328289 (+) | 948 | WP_094365650.1 | L-threonine 3-dehydrogenase | - |
| GJ664_RS06560 (GJ664_06560) | liaX | 1328476..1329957 (+) | 1482 | WP_094365651.1 | daptomycin-sensing surface protein LiaX | - |
| GJ664_RS06565 (GJ664_06565) | - | 1329985..1330221 (+) | 237 | WP_016264736.1 | PspC domain-containing protein | - |
| GJ664_RS06570 (GJ664_06570) | - | 1330221..1330496 (+) | 276 | WP_094365652.1 | hypothetical protein | - |
| GJ664_RS06575 (GJ664_06575) | - | 1330496..1330870 (+) | 375 | WP_025016320.1 | phage holin family protein | - |
| GJ664_RS06580 (GJ664_06580) | hprK | 1331008..1331949 (+) | 942 | WP_016264738.1 | HPr(Ser) kinase/phosphatase | - |
| GJ664_RS06585 (GJ664_06585) | lgt | 1332077..1332904 (+) | 828 | WP_025016319.1 | prolipoprotein diacylglyceryl transferase | - |
| GJ664_RS06590 (GJ664_06590) | - | 1332922..1333944 (+) | 1023 | WP_016264740.1 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase | - |
| GJ664_RS06595 (GJ664_06595) | - | 1334115..1334462 (+) | 348 | WP_229295513.1 | hypothetical protein | - |
| GJ664_RS06600 (GJ664_06600) | trxB | 1334579..1335499 (+) | 921 | WP_016264742.1 | thioredoxin-disulfide reductase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 38254.25 Da Isoelectric Point: 4.6316
>NTDB_id=400423 GJ664_RS06440 WP_011374196.1 1302255..1303322(+) (recA) [Latilactobacillus sakei strain CBA3614]
MAKDERQAALDAALKKIEKNFGKGSIMRMGEKVDTQVSTVSSGSLALDEALGVGGYPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDILVVDSVAALVPRAEIEGEMG
DAHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPEVTPGGRALKFYSTVRLEVRRAETIKNGTDMIGN
RARIKVVKNKVAPPFKVAEVDIMYGQGISRTGELVDMAVEKDIINKSGSWYSYGSERIGQGRENAKNYLADHEDVEDEVR
LKVRAAYGISDVPEEDLPTTEDEQINILPDDSTEE
MAKDERQAALDAALKKIEKNFGKGSIMRMGEKVDTQVSTVSSGSLALDEALGVGGYPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDDLLLSQPDTGEQGLEIADALVSSGAVDILVVDSVAALVPRAEIEGEMG
DAHVGLQARLMSQALRKLSGTINKTKTIALFINQIREKVGVMFGNPEVTPGGRALKFYSTVRLEVRRAETIKNGTDMIGN
RARIKVVKNKVAPPFKVAEVDIMYGQGISRTGELVDMAVEKDIINKSGSWYSYGSERIGQGRENAKNYLADHEDVEDEVR
LKVRAAYGISDVPEEDLPTTEDEQINILPDDSTEE
Nucleotide
Download Length: 1068 bp
>NTDB_id=400423 GJ664_RS06440 WP_011374196.1 1302255..1303322(+) (recA) [Latilactobacillus sakei strain CBA3614]
TTGGCTAAAGATGAAAGACAAGCAGCACTTGATGCTGCCCTAAAGAAGATTGAAAAGAATTTTGGTAAAGGTTCAATTAT
GCGAATGGGTGAAAAGGTTGATACACAAGTCTCAACAGTTTCATCTGGTTCATTGGCATTGGACGAAGCGCTCGGAGTAG
GTGGTTATCCTCGCGGCCGGATCGTTGAAATTTACGGTCCTGAAAGTTCAGGTAAAACAACCGTTGCGTTACATGCTGTT
GCAGAAGTGCAAAAGCAAGGTGGAACGGCTGCTTATATCGATGCTGAAAATGCGATGGATCCTAAGTATGCAACAGCACT
TGGCGTTAATATTGATGACTTACTCTTGTCACAACCTGATACTGGTGAACAAGGCTTAGAAATTGCTGATGCCTTGGTAT
CAAGTGGGGCCGTTGATATTTTAGTTGTCGATTCAGTTGCCGCTTTGGTACCACGTGCTGAAATCGAAGGTGAAATGGGT
GACGCCCACGTTGGCTTACAAGCGCGTTTGATGTCACAAGCCTTACGTAAATTATCAGGGACGATTAATAAGACGAAGAC
GATTGCGTTATTCATTAACCAAATTCGTGAAAAAGTCGGCGTGATGTTTGGTAACCCCGAAGTCACACCAGGTGGTCGTG
CTTTGAAGTTCTACTCAACTGTTCGGCTTGAAGTGCGTCGTGCTGAAACCATCAAAAATGGGACAGATATGATTGGGAAC
CGGGCCCGAATCAAAGTCGTTAAGAATAAGGTTGCGCCACCATTTAAGGTCGCTGAAGTTGATATCATGTACGGTCAAGG
GATTTCCAGAACCGGTGAATTGGTTGATATGGCGGTCGAAAAAGACATTATCAATAAGAGTGGTTCTTGGTACTCTTATG
GCTCAGAACGAATTGGCCAAGGGCGAGAAAATGCTAAGAACTATTTGGCTGATCACGAAGATGTCGAAGATGAAGTTCGT
TTGAAGGTCAGAGCAGCTTATGGTATTTCAGATGTACCTGAAGAAGATCTCCCAACAACTGAAGATGAACAAATAAATAT
TTTACCAGATGATTCAACAGAAGAATAA
TTGGCTAAAGATGAAAGACAAGCAGCACTTGATGCTGCCCTAAAGAAGATTGAAAAGAATTTTGGTAAAGGTTCAATTAT
GCGAATGGGTGAAAAGGTTGATACACAAGTCTCAACAGTTTCATCTGGTTCATTGGCATTGGACGAAGCGCTCGGAGTAG
GTGGTTATCCTCGCGGCCGGATCGTTGAAATTTACGGTCCTGAAAGTTCAGGTAAAACAACCGTTGCGTTACATGCTGTT
GCAGAAGTGCAAAAGCAAGGTGGAACGGCTGCTTATATCGATGCTGAAAATGCGATGGATCCTAAGTATGCAACAGCACT
TGGCGTTAATATTGATGACTTACTCTTGTCACAACCTGATACTGGTGAACAAGGCTTAGAAATTGCTGATGCCTTGGTAT
CAAGTGGGGCCGTTGATATTTTAGTTGTCGATTCAGTTGCCGCTTTGGTACCACGTGCTGAAATCGAAGGTGAAATGGGT
GACGCCCACGTTGGCTTACAAGCGCGTTTGATGTCACAAGCCTTACGTAAATTATCAGGGACGATTAATAAGACGAAGAC
GATTGCGTTATTCATTAACCAAATTCGTGAAAAAGTCGGCGTGATGTTTGGTAACCCCGAAGTCACACCAGGTGGTCGTG
CTTTGAAGTTCTACTCAACTGTTCGGCTTGAAGTGCGTCGTGCTGAAACCATCAAAAATGGGACAGATATGATTGGGAAC
CGGGCCCGAATCAAAGTCGTTAAGAATAAGGTTGCGCCACCATTTAAGGTCGCTGAAGTTGATATCATGTACGGTCAAGG
GATTTCCAGAACCGGTGAATTGGTTGATATGGCGGTCGAAAAAGACATTATCAATAAGAGTGGTTCTTGGTACTCTTATG
GCTCAGAACGAATTGGCCAAGGGCGAGAAAATGCTAAGAACTATTTGGCTGATCACGAAGATGTCGAAGATGAAGTTCGT
TTGAAGGTCAGAGCAGCTTATGGTATTTCAGATGTACCTGAAGAAGATCTCCCAACAACTGAAGATGAACAAATAAATAT
TTTACCAGATGATTCAACAGAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.