Detailed information NTG0039994

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACMV_RS04230
• Genome accession: NC_015186
• Coordinates: 975369..976400 (-)
• Length: 343 a.a.
• NCBI ID: WP_007423960.1
• Uniprot ID: -
• Organism: Acidiphilium multivorum AIU301
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	973872..974888	975369..976400	flank	481

Gene organization within MGE regions

Location: 973872..976400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMV_RS04225 (ACMV_08560)	-	973872..974888 (+)	1017	WP_007421341.1	IS1595-like element ISAcr1 family transposase	-
ACMV_RS04230 (ACMV_08570)	recA	975369..976400 (-)	1032	WP_007423960.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 36859.10 Da
• Isoelectric Point: 5.5359

>NTDB_id=39994 ACMV_RS04230 WP_007423960.1 975369..976400(-) (recA) [Acidiphilium multivorum AIU301]
MEKNKALDAALAQIERAFGKGSIMRMGSRSESEAIDVISTGSLGLDLALGIGGLPRGRVIEIYGPESSGKTTLALHAVAE
AQKRGGTCAFVDAEHALDPIYARKLGVDVDNLLISQPDTGEQALEIADTLVRSGAIDVLVVDSVAALVPRAELEGEMGDS
HVGLHARLMSQALRKLTGSISRSKTLVIFLNQIRLKIGVMFGNPETTTGGNALKFYASIRMDIRRIGSIKDREEVTGNQT
RVKVVKNKLAPPFRQVEFDIMYGEGISKVGELLDLGVKAGIVEKSGAWFSCDSQRIGQGRENAKQFLRDNPDVAASIEQR
IRAQANLVEAAMITDETETEAAD

Nucleotide

• Length: 1032 bp

>NTDB_id=39994 ACMV_RS04230 WP_007423960.1 975369..976400(-) (recA) [Acidiphilium multivorum AIU301]
ATGGAAAAGAACAAGGCACTCGACGCCGCCCTGGCCCAGATCGAGCGCGCCTTCGGCAAGGGCTCGATCATGCGCATGGG
CTCGCGCAGCGAATCCGAGGCGATCGACGTCATTTCCACCGGCTCGCTCGGGCTCGACCTCGCCCTCGGCATCGGCGGCC
TGCCCCGCGGCCGCGTGATCGAGATCTACGGCCCCGAATCCTCGGGCAAGACCACCCTCGCCCTGCACGCCGTGGCCGAG
GCGCAGAAGCGCGGCGGCACCTGCGCCTTCGTCGACGCCGAGCACGCGCTCGACCCGATCTACGCCCGCAAGCTCGGCGT
CGATGTCGACAACCTGCTGATCTCCCAGCCCGACACCGGCGAACAGGCGCTCGAAATCGCCGACACCCTGGTCCGCTCCG
GCGCGATCGACGTCCTCGTGGTCGACTCCGTCGCCGCCCTCGTCCCCCGCGCCGAGCTCGAGGGCGAGATGGGCGACAGC
CATGTCGGCCTGCACGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGGCTCGATCTCGCGCTCGAAGACCCTGGT
GATCTTCCTCAACCAGATCCGCCTCAAGATCGGCGTCATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACGCGCTGA
AATTCTACGCCTCCATCCGCATGGACATCCGCCGCATCGGCTCGATCAAGGACCGCGAGGAAGTCACCGGCAACCAGACC
CGCGTGAAGGTGGTCAAGAACAAGCTCGCCCCGCCCTTCCGCCAGGTCGAGTTCGACATCATGTACGGCGAGGGCATCTC
CAAGGTCGGCGAACTGCTCGATCTCGGGGTGAAGGCCGGCATCGTCGAGAAATCCGGCGCCTGGTTCTCCTGCGACAGCC
AGCGCATCGGCCAGGGCCGCGAGAACGCGAAACAGTTCCTCCGCGACAACCCCGACGTCGCCGCCTCCATCGAACAACGC
ATCCGCGCCCAGGCCAACCTCGTCGAAGCCGCCATGATCACCGACGAAACCGAAACCGAAGCCGCCGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (5-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	69.706	99.125	0.691
recA	Neisseria gonorrhoeae MS11	69.706	99.125	0.691
recA	Neisseria gonorrhoeae strain FA1090	69.706	99.125	0.691
recA	Ralstonia pseudosolanacearum GMI1000	69.113	95.335	0.659
recA	Acinetobacter baylyi ADP1	65.689	99.417	0.653
recA	Pseudomonas stutzeri DSM 10701	69.565	93.878	0.653
recA	Glaesserella parasuis strain SC1401	69.159	93.586	0.647
recA	Vibrio cholerae strain A1552	63.848	100	0.638
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.848	100	0.638
recA	Acinetobacter baumannii D1279779	66.77	93.878	0.627
recA	Bacillus subtilis subsp. subtilis str. 168	65.644	95.044	0.624
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.732	93.586	0.615
recA	Helicobacter pylori 26695	64.907	93.878	0.609
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.415	95.627	0.606
recA	Helicobacter pylori strain NCTC11637	64.596	93.878	0.606
recA	Latilactobacillus sakei subsp. sakei 23K	64.596	93.878	0.606
recA	Streptococcus mitis SK321	60	100	0.603
recA	Streptococcus mitis NCTC 12261	60	100	0.603
recA	Streptococcus pneumoniae D39	59.475	100	0.595
recA	Streptococcus pneumoniae R6	59.475	100	0.595
recA	Streptococcus pneumoniae Rx1	59.475	100	0.595
recA	Streptococcus pneumoniae TIGR4	59.475	100	0.595
recA	Streptococcus mutans UA159	59.94	96.793	0.58
recA	Streptococcus pyogenes NZ131	60.55	95.335	0.577
recA	Lactococcus lactis subsp. cremoris KW2	58.683	97.376	0.571
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.752	94.169	0.563