Detailed information NTG0039887

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: WEEVI_RS06885
• Genome accession: NC_015144
• Coordinates: 1421900..1422898 (+)
• Length: 332 a.a.
• NCBI ID: WP_013598429.1
• Uniprot ID: -
• Organism: Weeksella virosa DSM 16922
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1416900..1427898

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WEEVI_RS06860 (Weevi_1332)	trxA	1420208..1420525 (+)	318	WP_013598426.1	thioredoxin	-
WEEVI_RS06875 (Weevi_1333)	-	1420896..1421303 (+)	408	WP_013598427.1	NUDIX domain-containing protein	-
WEEVI_RS06880 (Weevi_1334)	bcp	1421434..1421889 (+)	456	WP_013598428.1	thioredoxin-dependent thiol peroxidase	-
WEEVI_RS06885 (Weevi_1335)	recA	1421900..1422898 (+)	999	WP_013598429.1	recombinase RecA	Machinery gene
WEEVI_RS06890 (Weevi_1336)	-	1422993..1424435 (-)	1443	WP_041942306.1	hypothetical protein	-
WEEVI_RS06895 (Weevi_1337)	-	1424567..1425337 (+)	771	WP_013598431.1	MBL fold metallo-hydrolase	-
WEEVI_RS06905 (Weevi_1338)	-	1425663..1425857 (-)	195	WP_013598432.1	phosphoadenosine phosphosulfate reductase family protein	-
WEEVI_RS11505	-	1425870..1425998 (-)	129	WP_260181901.1	hypothetical protein	-
WEEVI_RS06910 (Weevi_1339)	-	1426081..1426461 (-)	381	WP_013597374.1	ASCH domain-containing protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36260.40 Da
• Isoelectric Point: 4.9850

>NTDB_id=39887 WEEVI_RS06885 WP_013598429.1 1421900..1422898(+) (recA) [Weeksella virosa DSM 16922]
MSDSDNKKKALQLVLDKMDKAYGKGTVMRMGDSAIDDKIEVIPSGSLGLDIALGVGGYPRGRVIEIYGPESSGKTTLTLH
AIAEAQKQGGIAAFIDAEHAFDRYYAEKLGVNIEELIVSQPDNGEQALEIADNLIRSGAIDIIVIDSVAALTPKAEIEGE
MGDSRMGLQARLMSQALRKLTATINKTKCTAIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKNGDEVI
GNHTKVKVVKNKVAPPFRQAEFDIMYGEGISKVGEILDLAVEKGIVQKSGSWYSYNESKLGQGRDAVKEVLRDNPELSEE
IEEKILEVIREE

Nucleotide

• Length: 999 bp

>NTDB_id=39887 WEEVI_RS06885 WP_013598429.1 1421900..1422898(+) (recA) [Weeksella virosa DSM 16922]
ATGAGTGATTCAGATAATAAAAAGAAAGCATTACAACTTGTTCTCGATAAGATGGACAAGGCATACGGTAAAGGAACTGT
AATGCGAATGGGCGACTCTGCCATAGACGATAAAATAGAAGTAATACCTTCGGGATCATTAGGCTTAGATATAGCCTTAG
GAGTAGGAGGTTATCCTCGCGGCCGTGTAATAGAAATCTACGGACCAGAATCTTCTGGTAAAACTACTCTTACACTTCAT
GCTATTGCCGAAGCTCAAAAGCAGGGAGGTATTGCAGCATTTATTGATGCCGAACATGCTTTTGATCGCTATTATGCAGA
AAAATTAGGAGTTAATATAGAAGAGCTAATTGTCTCTCAGCCCGATAATGGTGAGCAAGCTCTAGAGATTGCAGATAATC
TTATCCGTTCGGGGGCAATCGATATAATTGTAATCGACTCGGTAGCTGCCTTGACTCCGAAAGCGGAAATCGAAGGAGAA
ATGGGAGATTCTCGTATGGGATTACAAGCTCGTTTGATGTCGCAGGCATTACGTAAATTGACTGCCACAATCAATAAAAC
AAAATGTACAGCAATCTTCATTAATCAGTTAAGAGAGAAAATTGGGGTGATGTTTGGTAATCCAGAGACAACCACCGGAG
GAAATGCATTGAAGTTTTATGCTTCTGTTCGATTAGATATCCGTCGCTCTACACAAATAAAAAACGGAGACGAAGTTATT
GGAAACCATACAAAAGTAAAAGTCGTAAAAAACAAAGTAGCTCCACCTTTCCGTCAGGCAGAATTCGATATTATGTATGG
CGAAGGAATCTCGAAAGTTGGTGAAATACTCGATTTAGCAGTGGAAAAAGGCATTGTGCAAAAATCGGGTTCGTGGTACT
CGTATAATGAAAGTAAACTAGGACAAGGGCGTGATGCTGTAAAAGAAGTTCTGAGAGATAATCCGGAGTTGTCAGAAGAA
ATCGAAGAGAAAATATTAGAAGTTATTCGTGAAGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	77.246	100	0.777
recA	Bacillus subtilis subsp. subtilis str. 168	68.196	98.494	0.672
recA	Acinetobacter baylyi ADP1	67.378	98.795	0.666
recA	Ralstonia pseudosolanacearum GMI1000	70.323	93.373	0.657
recA	Neisseria gonorrhoeae MS11	67.391	96.988	0.654
recA	Neisseria gonorrhoeae strain FA1090	67.391	96.988	0.654
recA	Neisseria gonorrhoeae MS11	67.391	96.988	0.654
recA	Acinetobacter baumannii D1279779	66.873	97.289	0.651
recA	Pseudomonas stutzeri DSM 10701	66.044	96.687	0.639
recA	Streptococcus pyogenes NZ131	64.615	97.892	0.633
recA	Streptococcus mitis SK321	65.015	97.289	0.633
recA	Glaesserella parasuis strain SC1401	65.015	97.289	0.633
recA	Streptococcus mitis NCTC 12261	65.015	97.289	0.633
recA	Streptococcus mutans UA159	64.308	97.892	0.63
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.907	96.988	0.63
recA	Streptococcus pneumoniae D39	64.087	97.289	0.623
recA	Streptococcus pneumoniae TIGR4	64.087	97.289	0.623
recA	Streptococcus pneumoniae Rx1	64.087	97.289	0.623
recA	Streptococcus pneumoniae R6	64.087	97.289	0.623
recA	Helicobacter pylori strain NCTC11637	62.727	99.398	0.623
recA	Helicobacter pylori 26695	62.727	99.398	0.623
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.385	97.892	0.62
recA	Vibrio cholerae strain A1552	63.385	97.892	0.62
recA	Latilactobacillus sakei subsp. sakei 23K	64.174	96.687	0.62
recA	Lactococcus lactis subsp. cremoris KW2	63.467	97.289	0.617
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.402	99.699	0.572