Detailed information NTG0398716

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GII23_RS10260
• Genome accession: NZ_CP045858
• Coordinates: 2152288..2153340 (+)
• Length: 350 a.a.
• NCBI ID: WP_041104415.1
• Uniprot ID: A0A8D3Y250
• Organism: Stutzerimonas balearica strain EC28
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2150500..2151480	2152288..2153340	flank	808

Gene organization within MGE regions

Location: 2150500..2153340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII23_RS10250 (GII23_10210)	-	2150500..2151480 (-)	981	WP_021209969.1	IS5-like element ISPa52 family transposase	-
GII23_RS10255 (GII23_10215)	-	2151705..2152202 (+)	498	WP_041104413.1	CinA family protein	-
GII23_RS10260 (GII23_10220)	recA	2152288..2153340 (+)	1053	WP_041104415.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37257.62 Da
• Isoelectric Point: 5.3265

>NTDB_id=398716 GII23_RS10260 WP_041104415.1 2152288..2153340(+) (recA) [Stutzerimonas balearica strain EC28]
MDENKKRALAAALGQIEKQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKKGATCAFVDAEHALDPDYAAKLGVNVEDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
SHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYRSGEVIDLGVQQGLVEKSGAWYSYQGSKIGQGKANAAKFLEDNPAVGEEIER
LVREKLLVVSSNSKAAAGAVAEDDLVEADY

Nucleotide

• Length: 1053 bp

>NTDB_id=398716 GII23_RS10260 WP_041104415.1 2152288..2153340(+) (recA) [Stutzerimonas balearica strain EC28]
ATGGACGAGAACAAGAAGCGTGCCTTGGCTGCGGCTCTGGGCCAGATCGAAAAGCAGTTCGGCAAGGGTGCGGTCATGCG
CATGGGCGATCATGATCGCCAGGCCATTCCGGCTATTTCAACCGGCTCGCTCGGGCTCGATATCGCGCTGGGCATCGGCG
GCTTGCCAAAGGGCCGTATCGTCGAGATCTACGGTCCCGAGTCGTCCGGTAAGACCACGCTGACCCTGTCCGTCATTGCA
GAAGCCCAGAAGAAGGGTGCGACCTGCGCCTTCGTTGACGCCGAGCACGCGCTCGACCCCGACTATGCCGCCAAGCTGGG
CGTCAATGTCGAGGACCTGCTGGTTTCTCAGCCGGATACGGGTGAGCAGGCGCTGGAAATCACCGACATGCTGGTGCGCT
CCAATGCCGTCGACGTGATCATCGTCGACTCGGTTGCGGCCCTGGTGCCCAAGGCCGAGATCGAGGGCGAAATGGGTGAC
TCCCATGTCGGTCTGCAGGCGCGTCTGATGTCTCAGGCGCTGCGCAAGATCACCGGCAACATCAAGAACGCCAACTGTCT
GGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCCGAGACCACCACCGGTGGTAACGCAC
TGAAGTTCTATGCCTCGGTTCGTCTGGACATTCGCCGCACCGGTGCGGTGAAGGAGGGCGACGAGGTGGTTGGCAGCGAG
ACCCGCGTCAAGGTGGTGAAGAACAAGGTGGCGCCGCCGTTCCGCCAGGCCGAGTTCCAGATCCTGTACGGCAAGGGCAT
CTACCGCAGTGGCGAGGTCATCGACCTGGGCGTGCAGCAGGGCCTGGTCGAGAAATCCGGCGCCTGGTACAGCTATCAGG
GCAGCAAGATCGGGCAGGGTAAAGCCAACGCGGCCAAGTTCCTCGAGGACAACCCGGCTGTAGGCGAAGAGATCGAGCGG
CTGGTTCGTGAAAAGCTGCTGGTGGTCTCCTCGAACAGCAAGGCGGCGGCCGGTGCTGTGGCCGAGGATGATCTGGTCGA
AGCCGACTACTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	91.117	99.714	0.909
recA	Acinetobacter baylyi ADP1	74.212	99.714	0.74
recA	Acinetobacter baumannii D1279779	74.212	99.714	0.74
recA	Vibrio cholerae strain A1552	71.884	98.571	0.709
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.884	98.571	0.709
recA	Glaesserella parasuis strain SC1401	70.029	99.143	0.694
recA	Ralstonia pseudosolanacearum GMI1000	72.561	93.714	0.68
recA	Neisseria gonorrhoeae MS11	71.605	92.571	0.663
recA	Neisseria gonorrhoeae MS11	71.605	92.571	0.663
recA	Neisseria gonorrhoeae strain FA1090	71.605	92.571	0.663
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.874	95.429	0.6
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.914	93.429	0.597
recA	Helicobacter pylori strain NCTC11637	63.914	93.429	0.597
recA	Helicobacter pylori 26695	63.303	93.429	0.591
recA	Streptococcus pyogenes NZ131	57.714	100	0.577
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	91.714	0.577
recA	Streptococcus mutans UA159	60.308	92.857	0.56
recA	Latilactobacillus sakei subsp. sakei 23K	60.125	91.714	0.551
recA	Streptococcus mitis SK321	59.752	92.286	0.551
recA	Streptococcus pneumoniae R6	58.896	93.143	0.549
recA	Streptococcus pneumoniae Rx1	58.896	93.143	0.549
recA	Streptococcus pneumoniae D39	58.896	93.143	0.549
recA	Streptococcus pneumoniae TIGR4	58.896	93.143	0.549
recA	Streptococcus mitis NCTC 12261	59.443	92.286	0.549
recA	Lactococcus lactis subsp. cremoris KW2	57.585	92.286	0.531
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.215	93.143	0.514