Detailed information NTG0398676

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GH983_RS09955
• Genome accession: NZ_CP045854
• Coordinates: 2038612..2039700 (-)
• Length: 362 a.a.
• NCBI ID: WP_054149777.1
• Uniprot ID: A0A0N0JL57
• Organism: Agrobacterium sp. MA01
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2033612..2044700

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GH983_RS09945 (GH983_09945)	-	2034414..2035664 (-)	1251	WP_246727538.1	diguanylate cyclase	-
GH983_RS09950 (GH983_09950)	alaS	2035802..2038459 (-)	2658	WP_153762317.1	alanine--tRNA ligase	-
GH983_RS09955 (GH983_09955)	recA	2038612..2039700 (-)	1089	WP_054149777.1	recombinase RecA	Machinery gene
GH983_RS09960 (GH983_09960)	-	2039943..2040887 (+)	945	WP_153762318.1	carbohydrate kinase family protein	-
GH983_RS09965 (GH983_09965)	-	2040917..2041843 (+)	927	WP_153762319.1	pseudouridine-5'-phosphate glycosidase	-
GH983_RS09970 (GH983_09970)	cckA	2041935..2044556 (-)	2622	WP_153762320.1	cell cycle histidine kinase CckA	-

Sequence

Protein

• Length: 362 a.a.
• Molecular weight: 38756.39 Da
• Isoelectric Point: 5.1827

>NTDB_id=398676 GH983_RS09955 WP_054149777.1 2038612..2039700(-) (recA) [Agrobacterium sp. MA01]
MAQNSLRLVEDKSVDKSKALEAALSQIERSFGKGSIMKLGANESVVEVETVSTGSLSLDIALGIGGLPKGRIIEIYGPES
SGKTTLALQTIAEAQKKGGICAFVDAEHALDPIYARKLGVDLQNLLISQPDTGEQALEITDTLVRSGAIDVLVVDSVAAL
TPRAEIEGEMGDSLPGMQARLMSQALRKLTASISKSKTMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
AVKDREEVVGNQTRVKVVKNKMAPPFKQVEFDIMYGEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENAKLFL
RDNPAVSQEIEMALRQNAGLIAEKFLQNGGPDANDGDVADDA

Nucleotide

• Length: 1089 bp

>NTDB_id=398676 GH983_RS09955 WP_054149777.1 2038612..2039700(-) (recA) [Agrobacterium sp. MA01]
ATGGCACAGAATTCTTTGCGGCTTGTAGAGGACAAATCGGTGGATAAAAGCAAGGCATTGGAAGCGGCGCTCTCGCAGAT
CGAACGGTCGTTCGGCAAGGGCTCGATCATGAAACTCGGCGCGAACGAGAGCGTGGTCGAAGTCGAGACGGTCTCGACGG
GGTCGCTCAGCCTCGATATCGCGCTCGGCATTGGCGGCCTGCCGAAGGGGCGCATCATTGAAATTTACGGGCCTGAAAGC
TCGGGTAAGACGACGCTTGCGCTGCAGACTATCGCCGAAGCGCAGAAGAAGGGCGGCATCTGCGCCTTCGTCGATGCCGA
ACATGCGCTTGATCCTATCTATGCCCGCAAGCTCGGCGTCGATCTGCAGAACCTCCTGATTTCGCAGCCGGACACCGGCG
AGCAGGCACTTGAAATCACCGATACGCTGGTGCGCTCAGGCGCGATCGACGTGCTCGTGGTCGACTCGGTCGCTGCGCTG
ACGCCGCGTGCGGAAATCGAAGGCGAAATGGGCGACAGCCTGCCGGGCATGCAGGCTCGCCTGATGAGCCAGGCGCTGCG
CAAGCTGACGGCCTCGATCTCCAAGTCGAAGACGATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGT
TCGGCTCGCCGGAAACGACGACCGGCGGTAACGCGCTGAAGTTCTACGCCTCCGTGCGTCTCGACATTCGCCGTATCGGT
GCTGTCAAGGATCGCGAAGAGGTCGTCGGCAACCAGACCCGCGTCAAGGTCGTCAAGAACAAGATGGCGCCGCCCTTCAA
ACAGGTCGAATTCGACATCATGTATGGCGAAGGCGTCTCCAAGACCGGTGAGCTCGTCGATCTCGGCGTCAAGGCGGGCA
TTGTCGAGAAATCGGGGGCCTGGTTCTCCTATAACAGCCAGCGTCTCGGCCAGGGGCGTGAGAACGCGAAGCTCTTCCTG
CGCGACAATCCTGCGGTGTCCCAGGAAATCGAGATGGCGCTGCGCCAGAATGCCGGACTGATCGCGGAGAAATTCCTTCA
GAACGGTGGGCCCGACGCCAACGACGGTGATGTTGCCGACGACGCGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

3D structure

• AlphaFold DB: A0A0N0JL57

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	66.957	95.304	0.638
recA	Neisseria gonorrhoeae MS11	66.957	95.304	0.638
recA	Neisseria gonorrhoeae strain FA1090	66.957	95.304	0.638
recA	Acinetobacter baylyi ADP1	71.739	88.95	0.638
recA	Acinetobacter baumannii D1279779	71.429	88.95	0.635
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.06	92.541	0.63
recA	Vibrio cholerae strain A1552	68.06	92.541	0.63
recA	Glaesserella parasuis strain SC1401	66.176	93.923	0.622
recA	Ralstonia pseudosolanacearum GMI1000	71.019	86.74	0.616
recA	Pseudomonas stutzeri DSM 10701	68.847	88.674	0.61
recA	Bacillus subtilis subsp. subtilis str. 168	65.337	90.055	0.588
recA	Helicobacter pylori strain NCTC11637	65.031	90.055	0.586
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.832	90.331	0.586
recA	Helicobacter pylori 26695	64.724	90.055	0.583
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.526	90.331	0.583
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	65.3	87.569	0.572
recA	Streptococcus mitis SK321	61.934	91.436	0.566
recA	Latilactobacillus sakei subsp. sakei 23K	62.385	90.331	0.564
recA	Streptococcus mitis NCTC 12261	61.631	91.436	0.564
recA	Streptococcus pneumoniae R6	61.329	91.436	0.561
recA	Streptococcus pneumoniae Rx1	61.329	91.436	0.561
recA	Streptococcus pneumoniae D39	61.329	91.436	0.561
recA	Streptococcus pneumoniae TIGR4	61.329	91.436	0.561
recA	Streptococcus mutans UA159	59.76	91.989	0.55
recA	Lactococcus lactis subsp. cremoris KW2	59.403	92.541	0.55
recA	Streptococcus pyogenes NZ131	60.486	90.884	0.55