Detailed information NTG0398584

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GHC23_RS05415
• Genome accession: NZ_CP045840
• Coordinates: 1136811..1137875 (+)
• Length: 354 a.a.
• NCBI ID: WP_003037330.1
• Uniprot ID: -
• Organism: Citrobacter sp. S40-1-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1131811..1142875

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GHC23_RS05385	srlD	1131981..1132760 (-)	780	WP_003037345.1	sorbitol-6-phosphate dehydrogenase	-
GHC23_RS05390	srlB	1132778..1133140 (-)	363	WP_008785621.1	PTS glucitol/sorbitol transporter subunit IIA	-
GHC23_RS05395	-	1133154..1134125 (-)	972	WP_008785620.1	PTS glucitol/sorbitol transporter subunit IIB	-
GHC23_RS05400	srlA	1134122..1134685 (-)	564	WP_003037339.1	PTS glucitol/sorbitol transporter subunit IIC	-
GHC23_RS05405	mltB	1134950..1136029 (+)	1080	WP_194841956.1	lytic murein transglycosylase B	-
GHC23_RS05410	pncC	1136221..1136718 (+)	498	WP_048225249.1	nicotinamide-nucleotide amidase	-
GHC23_RS05415	recA	1136811..1137875 (+)	1065	WP_003037330.1	recombinase RecA	Machinery gene
GHC23_RS05420	recX	1137962..1138462 (+)	501	WP_008785618.1	recombination regulator RecX	-
GHC23_RS05425	alaS	1138591..1141218 (+)	2628	WP_103285682.1	alanine--tRNA ligase	-
GHC23_RS05430	csrA	1141457..1141642 (+)	186	WP_000906486.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38175.50 Da
• Isoelectric Point: 4.7535

>NTDB_id=398584 GHC23_RS05415 WP_003037330.1 1136811..1137875(+) (recA) [Citrobacter sp. S40-1-2]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQGKANATNWLKENPATAKEI
EKKLRELLLNNQDSTPDFSVDDSGEDVKETNEDF

Nucleotide

• Length: 1065 bp

>NTDB_id=398584 GHC23_RS05415 WP_003037330.1 1136811..1137875(+) (recA) [Citrobacter sp. S40-1-2]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCTGCAGCGCTGGGTCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGCTCCATGGATGTGGAAACTATCTCCACCGGTTCGCTTTCTCTGGATATCGCATTGGGCG
CGGGCGGTTTGCCAATGGGCCGTATCGTCGAAATCTACGGGCCTGAATCCTCCGGTAAAACAACGCTGACCCTGCAGGTT
ATTGCCGCTGCACAGCGTGAAGGTAAAACCTGTGCATTTATCGATGCGGAACACGCGCTGGATCCGGTCTATGCCCGTAA
GCTTGGCGTTGATATCGACAACCTGCTGTGTTCTCAGCCGGATACCGGTGAACAAGCGCTGGAAATCTGTGATGCGCTGG
CGCGCTCCGGTGCGGTTGACGTTATCGTTGTCGACTCCGTTGCCGCATTGACGCCGAAGGCAGAAATCGAAGGTGAGATT
GGCGACTCTCACATGGGCCTTGCGGCGCGTATGATGAGCCAGGCGATGCGTAAGCTGGCCGGTAACCTGAAGCAGTCCAA
CACGCTGCTGATTTTCATCAACCAGATCCGTATGAAGATTGGCGTTATGTTTGGTAACCCGGAAACCACCACCGGTGGTA
ACGCCCTGAAATTCTATGCGTCTGTTCGTCTGGATATCCGTCGTATTGGCGCGGTGAAAGAAGGCGACAATGTGGTCGGC
AGCGAAACCCGCGTTAAGGTTGTGAAAAACAAAATTGCAGCGCCGTTCAAACAGGCTGAATTCCAGATCCTTTATGGTGA
AGGCATCAACTTCTACGGCGAACTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCCGGTGCATGGTACAGCT
ACAACGGTGAGAAAATCGGTCAGGGTAAGGCGAATGCGACCAACTGGCTGAAAGAAAACCCGGCAACTGCGAAAGAAATT
GAGAAGAAATTACGTGAGTTACTGCTCAATAACCAGGATTCAACGCCTGATTTCTCCGTTGATGACAGCGGCGAAGACGT
AAAAGAAACGAACGAAGATTTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	81.792	97.74	0.799
recA	Vibrio cholerae O1 biovar El Tor strain E7946	81.792	97.74	0.799
recA	Pseudomonas stutzeri DSM 10701	74.184	95.198	0.706
recA	Acinetobacter baumannii D1279779	74.924	92.373	0.692
recA	Acinetobacter baylyi ADP1	74.618	92.373	0.689
recA	Glaesserella parasuis strain SC1401	69.231	99.153	0.686
recA	Neisseria gonorrhoeae MS11	69.325	92.09	0.638
recA	Neisseria gonorrhoeae MS11	69.325	92.09	0.638
recA	Neisseria gonorrhoeae strain FA1090	69.325	92.09	0.638
recA	Ralstonia pseudosolanacearum GMI1000	71.061	87.853	0.624
recA	Helicobacter pylori strain NCTC11637	61.424	95.198	0.585
recA	Helicobacter pylori 26695	61.128	95.198	0.582
recA	Latilactobacillus sakei subsp. sakei 23K	57.865	100	0.582
recA	Lactococcus lactis subsp. cremoris KW2	62.848	91.243	0.573
recA	Streptococcus pneumoniae D39	62.539	91.243	0.571
recA	Streptococcus pneumoniae R6	62.539	91.243	0.571
recA	Streptococcus mitis SK321	62.539	91.243	0.571
recA	Streptococcus mitis NCTC 12261	62.539	91.243	0.571
recA	Streptococcus pneumoniae TIGR4	62.539	91.243	0.571
recA	Streptococcus pneumoniae Rx1	62.539	91.243	0.571
recA	Streptococcus pyogenes NZ131	62.154	91.808	0.571
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	90.678	0.571
recA	Streptococcus mutans UA159	61.846	91.808	0.568
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.728	91.525	0.565
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.639	93.785	0.559
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.748	90.678	0.551