Detailed information NTG0039822

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: RAHAQ_RS03440
• Genome accession: NC_015061
• Coordinates: 741043..742107 (+)
• Length: 354 a.a.
• NCBI ID: WP_013574024.1
• Uniprot ID: A0A0H3F604
• Organism: Rahnella aceris
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 736043..747107

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAHAQ_RS03425 (Rahaq_0689)	-	736362..739022 (+)	2661	WP_013574021.1	hypothetical protein	-
RAHAQ_RS03430 (Rahaq_0690)	mltB	739176..740279 (+)	1104	WP_013574022.1	lytic murein transglycosylase B	-
RAHAQ_RS03435 (Rahaq_0691)	pncC	740441..740935 (+)	495	WP_013574023.1	nicotinamide-nucleotide amidase	-
RAHAQ_RS03440 (Rahaq_0692)	recA	741043..742107 (+)	1065	WP_013574024.1	recombinase RecA	Machinery gene
RAHAQ_RS03445 (Rahaq_0693)	recX	742279..742917 (+)	639	WP_370447458.1	recombination regulator RecX	-
RAHAQ_RS03450 (Rahaq_0694)	alaS	743056..745683 (+)	2628	WP_013574026.1	alanine--tRNA ligase	-
RAHAQ_RS03455 (Rahaq_0695)	csrA	745940..746125 (+)	186	WP_013574027.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37898.44 Da
• Isoelectric Point: 4.8760

>NTDB_id=39822 RAHAQ_RS03440 WP_013574024.1 741043..742107(+) (recA) [Rahnella aceris]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDVVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGININGELIDLGVKHKLIEKAGAWYSYNGEKIGQGKANSCNYLKENPKVAAEL
DKKLRDMLLSGTGELSVATTAEDADDNMETSEEF

Nucleotide

• Length: 1065 bp

>NTDB_id=39822 RAHAQ_RS03440 WP_013574024.1 741043..742107(+) (recA) [Rahnella aceris]
ATGGCTATTGATGAGAACAAGCAAAAAGCGTTAGCTGCAGCACTGGGCCAGATTGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGTCTGGGTGAAGATCGCTCTATGGACGTCGAAACGATCTCTACCGGCTCTTTGTCTTTGGATATCGCGTTAGGTG
CTGGCGGCTTGCCAATGGGCCGTATCGTTGAAATTTATGGTCCGGAATCCTCCGGTAAAACCACGCTGACTCTGCAGGTT
ATCGCTGCTGCACAGCGTGAAGGCAAAACCTGTGCGTTCATCGATGCAGAACACGCGCTGGACCCTATCTACGCTAAAAA
ACTGGGCGTCGATATCGATAACCTGCTGTGTTCTCAGCCAGATACCGGTGAACAGGCTCTGGAAATCTGTGATGCGCTGA
CCCGTTCAGGCGCCGTTGACGTTATCATCGTTGACTCCGTTGCCGCACTGACGCCAAAAGCTGAAATCGAAGGCGAAATT
GGTGACTCTCACATGGGCCTCGCAGCTCGTATGATGAGCCAGGCGATGCGTAAGCTTGCGGGTAACCTGAAAAACGCCAA
TACCCTGCTGATCTTCATCAACCAGATCCGTATGAAAATCGGTGTGATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCCCTGAAATTCTATGCCTCTGTACGTCTGGATATCCGTCGTATCGGCGCTATCAAAGAAGGTGATGTGGTTGTCGGT
AGTGAAACACGTGTGAAAGTCGTGAAGAACAAAATCGCCGCACCATTTAAACAAGCTGAATTCCAGATCCTGTACGGCGA
AGGTATCAACATCAACGGCGAACTGATCGACCTGGGTGTTAAGCACAAACTGATCGAGAAAGCGGGTGCATGGTACAGTT
ACAACGGCGAGAAGATTGGTCAGGGTAAAGCGAACTCTTGTAACTACCTCAAAGAAAACCCGAAAGTTGCTGCTGAACTG
GACAAAAAACTGCGTGATATGCTGCTGAGCGGCACCGGTGAATTGAGCGTTGCGACTACTGCTGAAGACGCTGACGACAA
CATGGAAACCAGCGAAGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A0A0H3F604

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	83.14	97.175	0.808
recA	Vibrio cholerae O1 biovar El Tor strain E7946	83.14	97.175	0.808
recA	Pseudomonas stutzeri DSM 10701	73.547	97.175	0.715
recA	Acinetobacter baylyi ADP1	69.855	97.458	0.681
recA	Glaesserella parasuis strain SC1401	68.571	98.87	0.678
recA	Acinetobacter baumannii D1279779	72.561	92.655	0.672
recA	Neisseria gonorrhoeae MS11	65.242	99.153	0.647
recA	Neisseria gonorrhoeae MS11	65.242	99.153	0.647
recA	Neisseria gonorrhoeae strain FA1090	65.242	99.153	0.647
recA	Ralstonia pseudosolanacearum GMI1000	67.576	93.22	0.63
recA	Streptococcus mitis SK321	63.158	91.243	0.576
recA	Helicobacter pylori strain NCTC11637	62.08	92.373	0.573
recA	Helicobacter pylori 26695	61.774	92.373	0.571
recA	Streptococcus pneumoniae Rx1	62.539	91.243	0.571
recA	Lactococcus lactis subsp. cremoris KW2	62.539	91.243	0.571
recA	Streptococcus pneumoniae TIGR4	62.539	91.243	0.571
recA	Streptococcus pneumoniae R6	62.539	91.243	0.571
recA	Streptococcus mitis NCTC 12261	62.539	91.243	0.571
recA	Streptococcus pneumoniae D39	62.539	91.243	0.571
recA	Streptococcus pyogenes NZ131	61.846	91.808	0.568
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.162	92.373	0.565
recA	Streptococcus mutans UA159	61.231	91.808	0.562
recA	Latilactobacillus sakei subsp. sakei 23K	61.231	91.808	0.562
recA	Bacillus subtilis subsp. subtilis str. 168	61.371	90.678	0.556
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.337	93.785	0.556
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.021	92.373	0.545