Detailed information NTG0395935

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GFH31_RS00015
• Genome accession: NZ_CP045651
• Coordinates: 2067..3083 (+)
• Length: 338 a.a.
• NCBI ID: WP_055203983.1
• Uniprot ID: A0A8B3CA76
• Organism: Alistipes sp. dk3624
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1..8083

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GFH31_RS00005 (GFH31_00005)	dnaA	1..1416 (+)	1416	WP_055204531.1	chromosomal replication initiator protein DnaA	-
GFH31_RS00010 (GFH31_00010)	bcp	1565..2026 (+)	462	WP_055204532.1	thioredoxin-dependent thiol peroxidase	-
GFH31_RS00015 (GFH31_00015)	recA	2067..3083 (+)	1017	WP_055203983.1	recombinase RecA	Machinery gene
GFH31_RS00020 (GFH31_00020)	-	3212..5440 (+)	2229	WP_101570771.1	RelA/SpoT family protein	-
GFH31_RS00025 (GFH31_00025)	-	5443..5922 (+)	480	WP_101570769.1	hypothetical protein	-
GFH31_RS00030 (GFH31_00030)	-	5934..6383 (+)	450	WP_153498022.1	DUF2867 domain-containing protein	-
GFH31_RS12830	-	6785..7183 (-)	399	WP_228385772.1	hypothetical protein	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 36212.67 Da
• Isoelectric Point: 6.5187

>NTDB_id=395935 GFH31_RS00015 WP_055203983.1 2067..3083(+) (recA) [Alistipes sp. dk3624]
MAEKEKPQVNPEKLKVLSAVMDKIEKDFGKGAIMKMSDRAVDKVPVIPSGSVTIDHALGIGGYPKGRIIEIFGPESSGKT
TLAIHAIAEAQKAGGIAAFIDAEHAFDSTYAQKLGVDIDDLLISQPDNGEQALEIADHLIRSSAIDIVVIDSVAALTPKA
EIEGEMGESKMGLQARLMSQALRKLTANISKTGTVCIFINQLRDKIGVVYGNPETTTGGNALKFYASVRVDIRKASVIKD
GEEQMGARARVKIVKNKLAPPFRKAEFDIMYGEGISKIGEIIDLGVDQGIIKKSGSWFSYGDRKIGQGRDAVKEAFKADP
EFAAEVEAKVREALAAAG

Nucleotide

• Length: 1017 bp

>NTDB_id=395935 GFH31_RS00015 WP_055203983.1 2067..3083(+) (recA) [Alistipes sp. dk3624]
ATGGCAGAAAAGGAGAAGCCTCAGGTGAATCCTGAGAAGCTCAAGGTATTGAGCGCCGTGATGGATAAGATCGAGAAGGA
TTTCGGGAAAGGCGCCATCATGAAAATGAGCGACCGGGCGGTCGACAAAGTCCCGGTCATCCCGTCCGGGTCGGTAACGA
TCGACCATGCGCTCGGGATCGGCGGGTATCCGAAAGGACGTATTATCGAGATTTTCGGCCCCGAATCGTCGGGTAAAACC
ACGCTGGCTATCCACGCGATCGCCGAGGCCCAGAAAGCGGGCGGAATCGCCGCATTTATCGACGCGGAACATGCTTTCGA
CAGCACGTATGCGCAGAAGCTCGGCGTGGATATCGACGACCTGCTGATTTCGCAGCCCGACAACGGGGAGCAGGCGCTGG
AGATCGCCGACCACCTGATCCGTTCGAGCGCCATCGATATCGTGGTGATCGACTCGGTCGCCGCGCTGACGCCGAAGGCC
GAAATCGAAGGCGAGATGGGCGAATCGAAAATGGGGTTGCAGGCGCGACTGATGTCGCAGGCTTTGCGTAAACTGACGGC
CAATATCAGCAAGACGGGAACCGTTTGTATTTTCATCAACCAACTTCGCGATAAGATCGGCGTGGTTTACGGGAATCCGG
AGACTACGACGGGCGGTAATGCGCTGAAATTTTACGCCAGCGTCCGGGTCGATATCCGCAAGGCTTCGGTGATCAAAGAC
GGAGAAGAACAGATGGGCGCGCGGGCGCGTGTCAAGATCGTGAAAAACAAACTGGCTCCCCCGTTCCGCAAAGCGGAATT
CGATATCATGTACGGCGAAGGAATTTCGAAGATCGGCGAGATCATCGACCTGGGAGTGGATCAGGGAATTATCAAGAAGA
GCGGCTCGTGGTTTTCTTACGGCGACAGGAAGATCGGACAAGGGCGCGATGCCGTCAAGGAGGCGTTCAAGGCCGATCCT
GAGTTTGCGGCCGAGGTGGAGGCCAAAGTGCGCGAAGCGCTTGCCGCCGCCGGTTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (15-276)

3D structure

• AlphaFold DB: A0A8B3CA76

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.836	100	0.686
recA	Neisseria gonorrhoeae MS11	63.551	94.97	0.604
recA	Neisseria gonorrhoeae strain FA1090	63.551	94.97	0.604
recA	Neisseria gonorrhoeae MS11	63.551	94.97	0.604
recA	Glaesserella parasuis strain SC1401	61.515	97.633	0.601
recA	Ralstonia pseudosolanacearum GMI1000	64.63	92.012	0.595
recA	Acinetobacter baumannii D1279779	60.606	97.633	0.592
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.121	97.929	0.589
recA	Acinetobacter baylyi ADP1	61.043	96.45	0.589
recA	Streptococcus mitis SK321	61.111	95.858	0.586
recA	Helicobacter pylori 26695	60.182	97.337	0.586
recA	Helicobacter pylori strain NCTC11637	60.182	97.337	0.586
recA	Streptococcus mitis NCTC 12261	60.802	95.858	0.583
recA	Streptococcus pneumoniae TIGR4	60.802	95.858	0.583
recA	Streptococcus pneumoniae R6	60.802	95.858	0.583
recA	Streptococcus pneumoniae D39	60.802	95.858	0.583
recA	Streptococcus pneumoniae Rx1	60.802	95.858	0.583
recA	Bacillus subtilis subsp. subtilis str. 168	62.025	93.491	0.58
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.816	96.45	0.577
recA	Vibrio cholerae strain A1552	59.816	96.45	0.577
recA	Pseudomonas stutzeri DSM 10701	59.816	96.45	0.577
recA	Streptococcus pyogenes NZ131	60.185	95.858	0.577
recA	Lactococcus lactis subsp. cremoris KW2	59.509	96.45	0.574
recA	Latilactobacillus sakei subsp. sakei 23K	60.248	95.266	0.574
recA	Streptococcus mutans UA159	59.259	95.858	0.568
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.1	97.929	0.559