Detailed information NTG0393927

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GDR53_RS15475
• Genome accession: NZ_CP045422
• Coordinates: 3182097..3183170 (+)
• Length: 357 a.a.
• NCBI ID: WP_193335352.1
• Uniprot ID: -
• Organism: Devosia beringensis strain S02
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3177097..3188170

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GDR53_RS15460	-	3179331..3179726 (+)	396	WP_193335349.1	DUF2237 family protein	-
GDR53_RS15465	-	3179737..3180750 (-)	1014	WP_193335350.1	aldo/keto reductase	-
GDR53_RS15470	araD1	3180823..3181818 (-)	996	WP_193335351.1	AraD1 family protein	-
GDR53_RS15475	recA	3182097..3183170 (+)	1074	WP_193335352.1	recombinase RecA	Machinery gene
GDR53_RS15480	alaS	3183412..3186051 (+)	2640	WP_193335353.1	alanine--tRNA ligase	-
GDR53_RS15485	-	3186255..3186905 (+)	651	WP_193335354.1	pyridoxamine 5'-phosphate oxidase family protein	-
GDR53_RS15490	-	3186920..3187804 (-)	885	WP_193335355.1	DMT family transporter	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 37893.40 Da
• Isoelectric Point: 4.9502

>NTDB_id=393927 GDR53_RS15475 WP_193335352.1 3182097..3183170(+) (recA) [Devosia beringensis strain S02]
MANASLRVVEGGSMDKDKALAAALSQIERNFGKGSIMRLGEAAAIEVESISTGSLGLDIALGIGGLPKGRIVEIFGPESS
GKTTLALHVIAEAQKAGGICAFVDAEHALDPIYARKLGVNVDDLLISQPDAGEQALEITDTLVRSGAIDVLVIDSVAALT
PRAELEGEMGDSLPGLQARLMSQAMRKLTGSISKSKCLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGA
LKDREEIVGNQTRVKVVKNKLAPPFRQVEFDIMYGEGISKTGELLDLGVKAGIIEKAGAWFSWDSQRLGQGRENARQYLK
DNPDAARTIEQSVRESSGLLGEVLLVAGGDDAVGSDE

Nucleotide

• Length: 1074 bp

>NTDB_id=393927 GDR53_RS15475 WP_193335352.1 3182097..3183170(+) (recA) [Devosia beringensis strain S02]
ATGGCTAACGCGTCGCTTCGTGTTGTTGAAGGTGGATCGATGGATAAGGACAAGGCACTTGCCGCGGCGCTCAGCCAGAT
CGAGCGCAATTTCGGCAAGGGGTCGATCATGCGCCTGGGCGAGGCGGCAGCGATCGAAGTCGAGTCGATCTCGACCGGCT
CGCTCGGCCTCGACATTGCGCTGGGCATTGGCGGCCTGCCAAAGGGCCGTATCGTGGAGATTTTCGGGCCGGAAAGCTCG
GGCAAGACCACATTGGCGCTGCATGTGATTGCCGAGGCCCAGAAGGCCGGCGGCATCTGCGCCTTTGTCGATGCCGAGCA
TGCGCTCGACCCGATCTATGCCCGCAAGCTGGGCGTCAATGTCGATGACCTGCTGATCTCGCAGCCCGATGCCGGCGAGC
AGGCGCTGGAAATCACCGATACGCTGGTCCGCTCAGGCGCCATCGACGTGCTGGTGATCGATTCGGTGGCGGCGCTGACG
CCGCGGGCCGAGCTCGAAGGCGAAATGGGCGATTCACTGCCGGGCCTGCAGGCCCGCCTGATGAGCCAGGCCATGCGCAA
GCTGACCGGCTCGATCTCCAAGTCCAAGTGCCTGGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTATG
GCTCGCCCGAGACGACGACGGGCGGCAATGCGCTGAAATTCTACGCTTCGGTGCGCCTCGACATTCGCCGCATTGGCGCG
CTCAAGGATCGCGAAGAGATCGTGGGCAACCAGACGCGAGTCAAGGTGGTCAAGAACAAGCTGGCGCCGCCGTTCCGCCA
GGTCGAATTCGACATCATGTATGGCGAAGGCATTTCCAAGACCGGCGAGCTGCTCGATCTGGGCGTCAAGGCCGGCATCA
TCGAAAAGGCCGGCGCCTGGTTCTCCTGGGACAGCCAGCGGCTGGGCCAGGGGCGCGAGAATGCGCGGCAATATCTCAAG
GACAATCCGGATGCCGCCCGGACAATCGAGCAGAGCGTGCGCGAAAGCTCGGGCTTGCTGGGCGAAGTGCTGCTGGTGGC
CGGTGGCGACGACGCCGTGGGCAGCGACGAATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	67.353	95.238	0.641
recA	Neisseria gonorrhoeae MS11	67.353	95.238	0.641
recA	Neisseria gonorrhoeae strain FA1090	67.353	95.238	0.641
recA	Pseudomonas stutzeri DSM 10701	70.938	89.636	0.636
recA	Acinetobacter baylyi ADP1	66.181	96.078	0.636
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.093	89.916	0.63
recA	Vibrio cholerae strain A1552	70.093	89.916	0.63
recA	Glaesserella parasuis strain SC1401	70.093	89.916	0.63
recA	Acinetobacter baumannii D1279779	66.077	94.958	0.627
recA	Ralstonia pseudosolanacearum GMI1000	70.607	87.675	0.619
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.557	96.078	0.611
recA	Streptococcus mitis NCTC 12261	60.807	97.199	0.591
recA	Helicobacter pylori strain NCTC11637	63.746	92.717	0.591
recA	Helicobacter pylori 26695	63.746	92.717	0.591
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.22	91.597	0.588
recA	Bacillus subtilis subsp. subtilis str. 168	64	91.036	0.583
recA	Lactococcus lactis subsp. cremoris KW2	62.349	92.997	0.58
recA	Streptococcus mitis SK321	62.424	92.437	0.577
recA	Streptococcus pneumoniae R6	62.121	92.437	0.574
recA	Streptococcus pneumoniae Rx1	62.121	92.437	0.574
recA	Streptococcus pneumoniae D39	62.121	92.437	0.574
recA	Streptococcus pneumoniae TIGR4	62.121	92.437	0.574
recA	Latilactobacillus sakei subsp. sakei 23K	61.846	91.036	0.563
recA	Streptococcus mutans UA159	59.94	92.997	0.557
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.491	90.196	0.555
recA	Streptococcus pyogenes NZ131	61.111	90.756	0.555