Detailed information NTG0393906

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FIU82_RS11580
• Genome accession: NZ_CP045418
• Coordinates: 2484967..2486016 (-)
• Length: 349 a.a.
• NCBI ID: WP_152441117.1
• Uniprot ID: A0A5P9J053
• Organism: Pseudoalteromonas sp. THAF3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2479967..2491016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIU82_RS11570 (FIU82_11730)	-	2481366..2482496 (+)	1131	WP_253946363.1	DcaP family trimeric outer membrane transporter	-
FIU82_RS11575 (FIU82_11735)	-	2482660..2484786 (+)	2127	WP_152441116.1	TonB-dependent siderophore receptor	-
FIU82_RS11580 (FIU82_11740)	recA	2484967..2486016 (-)	1050	WP_152441117.1	recombinase RecA	Machinery gene
FIU82_RS11585 (FIU82_11745)	-	2486089..2486595 (-)	507	WP_152441118.1	CinA family protein	-
FIU82_RS11590 (FIU82_11750)	mutS	2486620..2489199 (+)	2580	WP_152441119.1	DNA mismatch repair protein MutS	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37509.01 Da
• Isoelectric Point: 5.1847

>NTDB_id=393906 FIU82_RS11580 WP_152441117.1 2484967..2486016(-) (recA) [Pseudoalteromonas sp. THAF3]
MNDNKSKALSAAVSQIERQFGKGSIMKLGDSQALDIEAISTGSLGIDIALGIGGLPTGRVVEIYGPESSGKTTLTLQVIA
QAQRDGKTCAFVDAEHALDPVYAEKLGVNVEELLVSQPDTGEQALEICDMLVRSGAVDVVIVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKRSNTLCVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSVKDGDEVIGNE
TRVKVVKNKVAPPFKQAEFIIMYGEGISKEGELIDLGVKHKLIEKSGAWYSYNGSKVGQGKSNSIKFLKENVEIANEIEG
KLREMLLLKATIKPEDGETNLLAAEAQSE

Nucleotide

• Length: 1050 bp

>NTDB_id=393906 FIU82_RS11580 WP_152441117.1 2484967..2486016(-) (recA) [Pseudoalteromonas sp. THAF3]
ATGAACGATAACAAATCAAAAGCCTTAAGTGCAGCGGTTTCGCAAATTGAGCGTCAATTCGGTAAAGGCTCAATTATGAA
GCTCGGTGATAGCCAGGCTTTGGATATTGAAGCCATTTCTACCGGCTCACTGGGAATCGATATCGCTCTAGGTATAGGTG
GTTTGCCGACCGGGCGTGTTGTTGAAATTTATGGCCCAGAATCGTCAGGTAAAACAACCCTTACATTACAAGTCATTGCT
CAAGCTCAGCGCGATGGTAAAACCTGTGCTTTCGTCGATGCCGAGCATGCCCTAGACCCTGTCTACGCCGAAAAGCTGGG
TGTTAATGTTGAAGAGCTACTGGTTTCGCAGCCGGATACTGGTGAGCAAGCGTTGGAAATTTGTGACATGCTAGTACGCT
CAGGCGCCGTTGATGTGGTCATTGTTGACTCGGTAGCTGCACTGACACCAAAAGCTGAAATTGAAGGCGAAATGGGTGAC
AGCCACGTTGGCTTGCAAGCACGTTTAATGTCACAGGCGCTGCGTAAGTTAACGGCAAATATCAAACGCTCAAACACCTT
ATGTGTGTTTATCAACCAAATCCGTATGAAGATTGGTGTGATGTTTGGTAACCCTGAAACCACCACCGGTGGTAATGCCC
TGAAGTTCTACTCGTCTGTACGTTTAGACATTCGCCGTATTGGTTCAGTGAAAGACGGTGATGAAGTGATCGGCAACGAG
ACCCGCGTCAAAGTAGTGAAAAACAAAGTGGCGCCGCCATTTAAGCAAGCCGAGTTTATCATCATGTATGGTGAAGGTAT
CTCCAAAGAGGGTGAGCTGATTGATTTAGGTGTGAAGCACAAGCTCATTGAAAAGTCTGGTGCTTGGTATAGCTACAACG
GCTCTAAAGTCGGCCAAGGTAAATCTAACTCTATTAAGTTCTTAAAAGAGAATGTTGAGATTGCCAATGAGATTGAAGGT
AAGCTACGGGAAATGTTGCTGCTTAAAGCAACCATTAAACCTGAAGACGGTGAAACCAACCTGCTAGCTGCTGAAGCGCA
GAGCGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A5P9J053

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	74.78	97.708	0.731
recA	Vibrio cholerae strain A1552	77.676	93.696	0.728
recA	Vibrio cholerae O1 biovar El Tor strain E7946	77.676	93.696	0.728
recA	Neisseria gonorrhoeae MS11	73.256	98.567	0.722
recA	Neisseria gonorrhoeae MS11	73.256	98.567	0.722
recA	Neisseria gonorrhoeae strain FA1090	73.256	98.567	0.722
recA	Glaesserella parasuis strain SC1401	72.754	98.854	0.719
recA	Acinetobacter baylyi ADP1	72.508	94.842	0.688
recA	Acinetobacter baumannii D1279779	71.601	94.842	0.679
recA	Ralstonia pseudosolanacearum GMI1000	74.277	89.112	0.662
recA	Bacillus subtilis subsp. subtilis str. 168	66.358	92.837	0.616
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.072	95.702	0.613
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.458	91.404	0.607
recA	Helicobacter pylori 26695	62.985	95.989	0.605
recA	Helicobacter pylori strain NCTC11637	62.985	95.989	0.605
recA	Streptococcus mutans UA159	60.55	93.696	0.567
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.442	91.404	0.562
recA	Streptococcus pneumoniae Rx1	60.681	92.55	0.562
recA	Streptococcus pneumoniae D39	60.681	92.55	0.562
recA	Streptococcus pneumoniae R6	60.681	92.55	0.562
recA	Streptococcus pneumoniae TIGR4	60.681	92.55	0.562
recA	Streptococcus mitis NCTC 12261	60.372	92.55	0.559
recA	Streptococcus mitis SK321	60.062	92.55	0.556
recA	Streptococcus pyogenes NZ131	58.716	93.696	0.55
recA	Latilactobacillus sakei subsp. sakei 23K	59.813	91.977	0.55
recA	Lactococcus lactis subsp. cremoris KW2	57.846	93.123	0.539