Detailed information NTG0393877

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FIU83_RS02295
• Genome accession: NZ_CP045417
• Coordinates: 515960..517024 (+)
• Length: 354 a.a.
• NCBI ID: WP_152482574.1
• Uniprot ID: -
• Organism: Halomonas sp. THAF5a
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 510960..522024

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIU83_RS02280 (FIU83_02315)	fdxA	512107..512430 (-)	324	WP_152482571.1	ferredoxin FdxA	-
FIU83_RS02285 (FIU83_02320)	mutS	512589..515177 (-)	2589	WP_152482572.1	DNA mismatch repair protein MutS	-
FIU83_RS02290 (FIU83_02325)	-	515330..515842 (+)	513	WP_152482573.1	CinA family protein	-
FIU83_RS02295 (FIU83_02330)	recA	515960..517024 (+)	1065	WP_152482574.1	recombinase RecA	Machinery gene
FIU83_RS02300 (FIU83_02335)	-	517028..517507 (+)	480	WP_152482575.1	regulatory protein RecX	-
FIU83_RS02305 (FIU83_02340)	alaS	517675..520284 (+)	2610	WP_152482576.1	alanine--tRNA ligase	-
FIU83_RS02310 (FIU83_02345)	-	520390..521640 (+)	1251	WP_152482577.1	aspartate kinase	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37760.04 Da
• Isoelectric Point: 4.8357

>NTDB_id=393877 FIU83_RS02295 WP_152482574.1 515960..517024(+) (recA) [Halomonas sp. THAF5a]
MAQDENRSKALNAALSQIERQFGKGTVMRLGDAPRVVMPSVSTGSLGLDIALGIGGLPLGRVVEIFGPESSGKTTLTLSV
IAQAQKQGKTCAFIDAEHALDPSYAEKLGVNLDDLLVSQPDTGEQALEICDMLVRSGGVDVIIVDSVAALTPRAEIEGEM
GDSHVGLQARLMSQALRKITGNIKNANCMVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSVKQGDEVTG
NETRVKVVKNKVAPPFRQAEFQILYGKGIYHAGEVVDLGVQCKLVDKAGAWYSYQGNKIGQGKANAAQFLEDNPAVMEEI
ESQIRAQLLTPVEPKKDEAADDALAAEDGGDELA

Nucleotide

• Length: 1065 bp

>NTDB_id=393877 FIU83_RS02295 WP_152482574.1 515960..517024(+) (recA) [Halomonas sp. THAF5a]
ATGGCTCAGGACGAAAACCGCAGCAAGGCGCTGAATGCCGCCCTCTCCCAGATCGAGCGCCAGTTCGGCAAGGGCACCGT
GATGCGCCTGGGCGACGCGCCCCGCGTGGTGATGCCGTCGGTCTCCACCGGCTCGCTGGGCCTGGACATCGCGCTCGGCA
TCGGCGGGCTGCCGCTGGGCCGGGTGGTCGAGATCTTCGGTCCGGAGTCCTCGGGCAAGACCACCCTGACGCTCTCGGTG
ATCGCCCAGGCCCAGAAGCAGGGCAAGACCTGCGCCTTCATCGACGCCGAGCACGCCCTGGACCCGAGCTACGCCGAGAA
GCTCGGCGTCAACCTCGATGACCTGCTGGTCTCCCAGCCCGATACCGGCGAGCAGGCGCTGGAGATCTGCGACATGCTGG
TGCGCTCCGGCGGCGTCGACGTGATCATCGTCGACTCGGTGGCGGCCCTGACCCCGCGCGCCGAGATCGAGGGCGAGATG
GGCGACTCCCACGTCGGCCTGCAGGCGCGCCTGATGTCCCAGGCGCTGCGCAAGATCACCGGCAACATCAAGAACGCCAA
CTGCATGGTGGTGTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCCGAGACCACCACCGGCGGCA
ACGCCCTGAAGTTCTACTCCAGCGTGCGCCTGGACATCCGCCGCACCGGCTCGGTCAAGCAGGGCGACGAGGTGACCGGC
AACGAGACCCGGGTCAAGGTGGTCAAGAACAAGGTGGCGCCGCCCTTCCGTCAGGCCGAGTTCCAGATCCTCTACGGCAA
GGGGATCTACCATGCCGGCGAGGTGGTCGACCTCGGCGTGCAGTGCAAGCTGGTCGACAAGGCCGGCGCCTGGTACAGCT
ACCAGGGCAACAAGATCGGCCAGGGCAAGGCCAATGCCGCCCAGTTCCTCGAGGACAACCCGGCGGTGATGGAGGAGATC
GAGAGCCAGATCCGCGCCCAGCTGCTCACCCCGGTGGAGCCGAAGAAGGACGAGGCCGCCGACGACGCCCTGGCCGCCGA
GGACGGCGGCGACGAGCTGGCCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	80	96.045	0.768
recA	Acinetobacter baylyi ADP1	74.212	98.588	0.732
recA	Acinetobacter baumannii D1279779	76.758	92.373	0.709
recA	Vibrio cholerae strain A1552	72.256	92.655	0.669
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.256	92.655	0.669
recA	Neisseria gonorrhoeae MS11	68.314	97.175	0.664
recA	Neisseria gonorrhoeae MS11	68.314	97.175	0.664
recA	Neisseria gonorrhoeae strain FA1090	68.314	97.175	0.664
recA	Glaesserella parasuis strain SC1401	71.914	91.525	0.658
recA	Ralstonia pseudosolanacearum GMI1000	71.519	89.266	0.638
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.677	94.35	0.582
recA	Streptococcus mitis SK321	57.222	100	0.582
recA	Streptococcus mitis NCTC 12261	57.222	100	0.582
recA	Helicobacter pylori 26695	62.31	92.938	0.579
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.883	92.09	0.579
recA	Helicobacter pylori strain NCTC11637	61.702	92.938	0.573
recA	Bacillus subtilis subsp. subtilis str. 168	63.125	90.395	0.571
recA	Streptococcus mutans UA159	56.145	100	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	59.347	95.198	0.565
recA	Streptococcus pneumoniae R6	54.521	100	0.562
recA	Streptococcus pneumoniae Rx1	54.521	100	0.562
recA	Streptococcus pneumoniae D39	54.521	100	0.562
recA	Streptococcus pneumoniae TIGR4	54.521	100	0.562
recA	Streptococcus pyogenes NZ131	58.232	92.655	0.54
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.846	91.808	0.531
recA	Lactococcus lactis subsp. cremoris KW2	56.173	91.525	0.514