Detailed information NTG0393579

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: FIV01_RS12560
• Genome accession: NZ_CP045350
• Coordinates: 2718141..2719187 (-)
• Length: 348 a.a.
• NCBI ID: WP_152431735.1
• Uniprot ID: A0A5P9CM10
• Organism: Vibrio aquimaris strain THAF100
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2713141..2724187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIV01_RS12545 (FIV01_12675)	-	2713426..2714613 (-)	1188	WP_152431286.1	aspartate kinase	-
FIV01_RS12550 (FIV01_12680)	alaS	2714790..2717372 (-)	2583	WP_152431287.1	alanine--tRNA ligase	-
FIV01_RS12555 (FIV01_12685)	recX	2717601..2718065 (-)	465	WP_152431288.1	recombination regulator RecX	-
FIV01_RS12560 (FIV01_12690)	recA	2718141..2719187 (-)	1047	WP_152431735.1	recombinase RecA	Machinery gene
FIV01_RS12565 (FIV01_12695)	pncC	2719365..2719850 (-)	486	WP_152431289.1	nicotinamide-nucleotide amidase	-
FIV01_RS12570 (FIV01_12700)	mutS	2719935..2722499 (+)	2565	WP_152431290.1	DNA mismatch repair protein MutS	-
FIV01_RS12575 (FIV01_12705)	lptG	2722537..2723607 (-)	1071	WP_152431291.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37555.03 Da
• Isoelectric Point: 4.8722

>NTDB_id=393579 FIV01_RS12560 WP_152431735.1 2718141..2719187(-) (recA) [Vibrio aquimaris strain THAF100]
MDDNKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVDIDALLVSQPDTGEQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGSIKEGDEVVGNE
TRIKVVKNKIAAPFKQAETQIMYGQGFNREGELIDLGVKHKLIEKAGAWYSYNGDKIGQGKANAAKFLRENVNVSQTIDA
TLRDMLLSPAEIQADDAELEQMPEKEEL

Nucleotide

• Length: 1047 bp

>NTDB_id=393579 FIV01_RS12560 WP_152431735.1 2718141..2719187(-) (recA) [Vibrio aquimaris strain THAF100]
ATGGACGATAACAAACAGAAAGCGCTCGCGGCAGCGCTTGGTCAGATTGAAAAGCAATTCGGTAAAGGTTCTATCATGCG
TCTTGGCGATAACCGTGCCATGGATGTAGAAACCATCTCTACTGGTTCACTTTCTCTTGATATTGCGTTAGGTGCTGGTG
GCCTTCCTATGGGGCGCATTGTCGAAATCTATGGTCCTGAATCATCGGGTAAAACGACACTCACTCTTGAACTTATTGCC
GCTGCTCAACGTGAAGGCAAAACCTGTGCTTTTATTGATGCAGAACATGCACTTGACCCTGTTTATGCGAAAAAATTGGG
CGTCGATATAGATGCCTTATTAGTGTCTCAGCCAGATACTGGTGAGCAAGCACTTGAAATTTGTGATGCATTAGCTCGCT
CTGGTGCGATTGACGTTATGGTGGTTGACTCTGTTGCTGCGTTAACGCCAAAAGCAGAAATTGAAGGTGAGATGGGTGAT
AGCCACATGGGTCTTCAGGCTCGTATGCTGTCGCAAGCTATGCGTAAACTAACGGGTAACCTTAAGCAGTCAAACTGTAT
GTGTATCTTCATTAACCAAATTCGTATGAAAATAGGTGTGATGTTTGGCAACCCTGAAACCACAACAGGTGGTAATGCAC
TTAAATTCTATGCTTCAGTTCGCCTTGATATTCGTCGTACAGGTTCAATCAAAGAAGGCGATGAAGTTGTCGGTAACGAA
ACTCGTATCAAAGTGGTTAAGAACAAGATCGCAGCGCCATTTAAACAAGCGGAAACTCAGATTATGTATGGTCAAGGGTT
TAACCGTGAAGGTGAGCTGATTGATTTGGGTGTGAAACACAAACTGATTGAGAAAGCTGGTGCTTGGTATAGCTACAATG
GTGATAAAATTGGCCAAGGTAAAGCGAATGCAGCCAAGTTCTTGCGTGAAAATGTGAATGTTTCGCAAACTATTGATGCT
ACGCTGCGCGATATGCTGCTTTCTCCCGCTGAAATTCAAGCTGATGACGCTGAGTTAGAGCAAATGCCAGAGAAAGAAGA
GTTGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A5P9CM10

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	87.819	100	0.891
recA	Vibrio cholerae strain A1552	87.819	100	0.891
recA	Acinetobacter baylyi ADP1	71.884	99.138	0.713
recA	Pseudomonas stutzeri DSM 10701	74.924	93.966	0.704
recA	Acinetobacter baumannii D1279779	70.64	98.851	0.698
recA	Glaesserella parasuis strain SC1401	66.193	100	0.67
recA	Neisseria gonorrhoeae MS11	70.37	93.103	0.655
recA	Neisseria gonorrhoeae MS11	70.37	93.103	0.655
recA	Neisseria gonorrhoeae strain FA1090	70.37	93.103	0.655
recA	Ralstonia pseudosolanacearum GMI1000	70.418	89.368	0.629
recA	Streptococcus pneumoniae Rx1	59.143	100	0.595
recA	Streptococcus pneumoniae TIGR4	59.143	100	0.595
recA	Streptococcus pneumoniae R6	59.143	100	0.595
recA	Streptococcus pneumoniae D39	59.143	100	0.595
recA	Helicobacter pylori 26695	59.593	98.851	0.589
recA	Helicobacter pylori strain NCTC11637	59.302	98.851	0.586
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.08	93.966	0.583
recA	Streptococcus mutans UA159	58.166	100	0.583
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	92.241	0.578
recA	Streptococcus mitis SK321	61.61	92.816	0.572
recA	Streptococcus pyogenes NZ131	60.923	93.391	0.569
recA	Streptococcus mitis NCTC 12261	61.3	92.816	0.569
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.215	95.115	0.563
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.222	90.517	0.563
recA	Latilactobacillus sakei subsp. sakei 23K	60.748	92.241	0.56
recA	Lactococcus lactis subsp. cremoris KW2	60.062	92.816	0.557