Detailed information NTG0039268

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: TMAR_RS05430
• Genome accession: NC_014831
• Coordinates: 1288234..1289256 (+)
• Length: 340 a.a.
• NCBI ID: WP_013495482.1
• Uniprot ID: E6SK36
• Organism: Thermaerobacter marianensis DSM 12885
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1283234..1294256

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TMAR_RS05415 (Tmar_1061)	-	1283892..1285301 (+)	1410	WP_013495479.1	competence/damage-inducible protein A	-
TMAR_RS05420 (Tmar_1062)	-	1285639..1287117 (+)	1479	WP_013495480.1	metallophosphoesterase	-
TMAR_RS12195 (Tmar_1063)	thpR	1287286..1288098 (+)	813	WP_013495481.1	RNA 2',3'-cyclic phosphodiesterase	-
TMAR_RS05430 (Tmar_1064)	recA	1288234..1289256 (+)	1023	WP_013495482.1	recombinase RecA	Machinery gene
TMAR_RS12200 (Tmar_1065)	-	1289266..1290060 (+)	795	WP_013495483.1	RecX family transcriptional regulator	-
TMAR_RS05440 (Tmar_1066)	rny	1290493..1292037 (+)	1545	WP_013495484.1	ribonuclease Y	-
TMAR_RS05445 (Tmar_1067)	-	1292164..1292958 (+)	795	WP_341348959.1	TIGR00282 family metallophosphoesterase	-
TMAR_RS05450 (Tmar_1068)	-	1293093..1294106 (+)	1014	WP_013495486.1	dipeptidase	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36542.90 Da
• Isoelectric Point: 5.7805

>NTDB_id=39268 TMAR_RS05430 WP_013495482.1 1288234..1289256(+) (recA) [Thermaerobacter marianensis DSM 12885]
MIERERALEIALSQIEKQFGKGSIMRMGEASSRLNVEVIPTGSLALDIALGVGGMPRGRIIEIFGPEASGKTTVALHVAA
SAQRAGGVAAFIDAEHALDPVYAENLGVDINNLLISQPDTGEQALEIAEALVRSGAVDVIVIDSVAALVPRAEIEGEMGD
AHVGLQARLMSQALRKLTGAIAKSRTCLIFINQIREKVGVMFGNPEVTPGGRALKFYASVRLDVRRVETLKQGGEMIGIR
ARAKVVKNKVAPPFRQAEFDLIYGKGISREGDLLDIATQHGIIEKSGAWYSYGDTRIGQGRENAREYLVQHPEVADAIEQ
RVRELLSLGGIRAATASEEE

Nucleotide

• Length: 1023 bp

>NTDB_id=39268 TMAR_RS05430 WP_013495482.1 1288234..1289256(+) (recA) [Thermaerobacter marianensis DSM 12885]
ATGATCGAGCGGGAACGGGCGCTGGAGATCGCCCTGAGCCAGATCGAGAAGCAGTTCGGCAAGGGTTCCATCATGCGCAT
GGGGGAGGCGTCCTCGCGGCTCAACGTCGAGGTGATCCCCACGGGATCCCTGGCGTTGGACATCGCCCTGGGGGTGGGCG
GCATGCCCCGGGGCCGGATCATCGAGATCTTCGGCCCTGAGGCATCGGGTAAGACCACCGTCGCCCTCCACGTGGCGGCG
TCGGCCCAGCGGGCAGGCGGCGTCGCCGCCTTCATCGACGCGGAACACGCCCTGGACCCGGTCTACGCGGAAAACCTGGG
GGTGGACATCAACAACCTGCTGATCTCCCAGCCGGACACCGGCGAGCAGGCCCTGGAGATCGCCGAAGCCCTGGTGCGCA
GCGGGGCCGTCGACGTCATCGTCATCGACTCCGTGGCCGCCCTGGTGCCCCGGGCCGAGATCGAAGGGGAGATGGGCGAC
GCCCACGTCGGCCTGCAGGCGCGGCTGATGTCCCAGGCCCTGCGCAAGCTGACGGGCGCCATCGCCAAGTCCCGCACCTG
CCTGATCTTCATCAACCAGATCCGCGAAAAGGTCGGGGTGATGTTCGGCAATCCGGAGGTGACCCCCGGCGGCCGGGCCT
TGAAGTTCTATGCCTCGGTGCGGCTTGACGTCCGGCGCGTCGAGACGCTGAAGCAGGGCGGCGAGATGATCGGCATCCGC
GCCCGCGCCAAGGTGGTCAAGAACAAGGTGGCGCCGCCCTTCCGCCAGGCGGAGTTCGACCTGATCTACGGCAAGGGCAT
CTCCCGGGAGGGCGACCTGCTGGATATCGCCACCCAGCACGGCATCATCGAGAAGTCCGGCGCCTGGTACTCCTACGGGG
ACACGCGCATCGGCCAGGGCCGGGAGAACGCCCGGGAGTATCTGGTTCAGCACCCCGAGGTGGCGGACGCCATCGAGCAG
CGGGTCCGCGAGCTGTTGAGCCTCGGCGGCATCCGGGCGGCGACGGCCAGCGAAGAGGAGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (6-268)

3D structure

• AlphaFold DB: E6SK36

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	70.717	94.412	0.668
recA	Bacillus subtilis subsp. subtilis str. 168	68.293	96.471	0.659
recA	Streptococcus mitis SK321	63.557	100	0.641
recA	Streptococcus pneumoniae Rx1	65.152	97.059	0.632
recA	Streptococcus pneumoniae D39	65.152	97.059	0.632
recA	Streptococcus pneumoniae R6	65.152	97.059	0.632
recA	Streptococcus pneumoniae TIGR4	65.152	97.059	0.632
recA	Ralstonia pseudosolanacearum GMI1000	65.846	95.588	0.629
recA	Streptococcus mitis NCTC 12261	65.538	95.588	0.626
recA	Glaesserella parasuis strain SC1401	62.722	99.412	0.624
recA	Pseudomonas stutzeri DSM 10701	65.432	95.294	0.624
recA	Streptococcus pyogenes NZ131	64.308	95.588	0.615
recA	Streptococcus mutans UA159	64.308	95.588	0.615
recA	Lactococcus lactis subsp. cremoris KW2	64	95.588	0.612
recA	Acinetobacter baylyi ADP1	61.538	99.412	0.612
recA	Vibrio cholerae O1 biovar El Tor strain E7946	64.087	95	0.609
recA	Vibrio cholerae strain A1552	64.087	95	0.609
recA	Acinetobacter baumannii D1279779	60.831	99.118	0.603
recA	Neisseria gonorrhoeae strain FA1090	65.385	91.765	0.6
recA	Neisseria gonorrhoeae MS11	65.385	91.765	0.6
recA	Neisseria gonorrhoeae MS11	65.385	91.765	0.6
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.24	94.412	0.597
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.237	99.118	0.597
recA	Helicobacter pylori strain NCTC11637	60.372	95	0.574
recA	Helicobacter pylori 26695	60.372	95	0.574
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.663	96.765	0.568