Detailed information NTG0392040

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GA645_RS20815
• Genome accession: NZ_CP045118
• Coordinates: 4567768..4568823 (-)
• Length: 351 a.a.
• NCBI ID: WP_152224972.1
• Uniprot ID: -
• Organism: Pseudomonas sp. SCB32
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4562768..4573823

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GA645_RS20800	-	4564590..4566011 (+)	1422	WP_152224965.1	MBL fold metallo-hydrolase RNA specificity domain-containing protein	-
GA645_RS20805	-	4566175..4567248 (+)	1074	WP_152224968.1	LOG family protein	-
GA645_RS20810	recX	4567298..4567762 (-)	465	WP_152224970.1	recombination regulator RecX	-
GA645_RS20815	recA	4567768..4568823 (-)	1056	WP_152224972.1	recombinase RecA	Machinery gene
GA645_RS20820	-	4568909..4569421 (-)	513	WP_152224974.1	CinA family protein	-
GA645_RS20825	mutS	4569504..4572077 (+)	2574	WP_178119585.1	DNA mismatch repair protein MutS	-
GA645_RS20830	fdxA	4572144..4572467 (+)	324	WP_152224976.1	ferredoxin FdxA	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 37586.93 Da
• Isoelectric Point: 5.1545

>NTDB_id=392040 GA645_RS20815 WP_152224972.1 4567768..4568823(-) (recA) [Pseudomonas sp. SCB32]
MDENKKRALAAALGQIERQFGKGAVMRMGDHERQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPDYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
QHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQIMYGRGIYRTGEIIDLGVQLGLIEKSGAWYSYQGNKIGQGKANAAKFLEDNTEICNTLDK
AIREQLLTNQPAPTKAELAAAEAEAEAEADY

Nucleotide

• Length: 1056 bp

>NTDB_id=392040 GA645_RS20815 WP_152224972.1 4567768..4568823(-) (recA) [Pseudomonas sp. SCB32]
ATGGACGAGAACAAGAAGCGCGCCCTGGCCGCGGCCCTGGGACAGATCGAACGCCAATTCGGCAAAGGCGCGGTCATGCG
CATGGGCGACCATGAGCGTCAGGCCATTCCGGCCATCTCCACCGGCTCGCTGGGCCTGGACATCGCCTTGGGCATCGGCG
GCCTGCCGAAGGGCCGTATCGTCGAAATCTACGGTCCGGAATCCTCGGGTAAGACCACCCTGACCCTGTCCGTCATCGCC
CAGGCCCAGAAGGCCGGCGCCACCTGCGCCTTCGTCGACGCCGAACACGCGCTGGACCCGGACTACGCCGGCAAGCTGGG
CGTCAATGTCGACGACCTGCTGGTTTCCCAGCCGGACACCGGCGAACAGGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCGTTGACGTGATCATCGTCGACTCCGTGGCCGCGCTGGTACCCAAAGCCGAAATCGAAGGCGAGATGGGCGAT
CAGCACGTTGGCCTGCAGGCGCGCCTGATGTCCCAGGCCCTGCGCAAGATCACCGGCAACATCAAGAATGCCAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGCAACCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACTCCTCGGTCCGCCTGGATATCCGCCGTACCGGCGCGGTGAAGGAAGGCGACGAGGTGGTCGGCAGCGAA
ACCCGCGTCAAGGTCGTGAAGAACAAGGTTGCACCGCCCTTCCGTCAGGCTGAGTTCCAGATCATGTACGGCCGCGGCAT
CTACCGCACCGGCGAGATCATCGACCTGGGCGTGCAGCTGGGCCTGATCGAGAAGTCCGGCGCCTGGTACAGCTACCAGG
GCAACAAGATCGGCCAGGGCAAGGCCAACGCCGCCAAGTTCCTGGAAGACAACACCGAGATCTGCAACACCCTCGACAAG
GCCATCCGCGAGCAACTGCTGACCAACCAGCCGGCGCCGACCAAGGCCGAGCTCGCAGCGGCGGAAGCCGAAGCGGAAGC
TGAAGCCGACTACTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	87.429	99.715	0.872
recA	Acinetobacter baylyi ADP1	72.857	99.715	0.726
recA	Vibrio cholerae strain A1552	72.832	98.575	0.718
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.832	98.575	0.718
recA	Acinetobacter baumannii D1279779	75	93.447	0.701
recA	Glaesserella parasuis strain SC1401	71.098	98.575	0.701
recA	Ralstonia pseudosolanacearum GMI1000	71.517	92.023	0.658
recA	Neisseria gonorrhoeae MS11	71.296	92.308	0.658
recA	Neisseria gonorrhoeae MS11	71.296	92.308	0.658
recA	Neisseria gonorrhoeae strain FA1090	71.296	92.308	0.658
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.138	93.162	0.607
recA	Helicobacter pylori strain NCTC11637	61.721	96.011	0.593
recA	Helicobacter pylori 26695	61.128	96.011	0.587
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.677	95.157	0.587
recA	Streptococcus mutans UA159	58.523	100	0.587
recA	Bacillus subtilis subsp. subtilis str. 168	63.043	91.738	0.578
recA	Streptococcus mitis NCTC 12261	59.816	92.877	0.556
recA	Latilactobacillus sakei subsp. sakei 23K	60.436	91.453	0.553
recA	Streptococcus pneumoniae Rx1	59.509	92.877	0.553
recA	Streptococcus mitis SK321	59.509	92.877	0.553
recA	Streptococcus pneumoniae D39	59.509	92.877	0.553
recA	Streptococcus pneumoniae R6	59.509	92.877	0.553
recA	Streptococcus pneumoniae TIGR4	59.509	92.877	0.553
recA	Streptococcus pyogenes NZ131	59.385	92.593	0.55
recA	Lactococcus lactis subsp. cremoris KW2	56.656	92.023	0.521
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.215	92.877	0.513