Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | GBN93_RS11390 | Genome accession | NZ_CP045103 |
| Coordinates | 2378055..2379098 (+) | Length | 347 a.a. |
| NCBI ID | WP_005401034.1 | Uniprot ID | A0A1T1JM42 |
| Organism | Acinetobacter johnsonii strain AJ413 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2339745..2379098 | 2378055..2379098 | within | 0 |
Gene organization within MGE regions
Location: 2339745..2379098
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBN93_RS11070 | - | 2339745..2340539 (-) | 795 | WP_234964375.1 | glycoside hydrolase family 108 protein | - |
| GBN93_RS11075 (GBN93_11155) | - | 2340596..2340982 (-) | 387 | WP_234964376.1 | hypothetical protein | - |
| GBN93_RS11080 (GBN93_11160) | - | 2341045..2341275 (-) | 231 | WP_004980417.1 | hypothetical protein | - |
| GBN93_RS11085 (GBN93_11165) | - | 2341268..2342485 (-) | 1218 | Protein_2166 | hypothetical protein | - |
| GBN93_RS11090 (GBN93_11170) | - | 2342552..2343717 (+) | 1166 | WP_234964377.1 | IS3-like element ISAba22 family transposase | - |
| GBN93_RS11095 | - | 2343668..2344753 (-) | 1086 | WP_234964378.1 | tape measure protein | - |
| GBN93_RS11100 (GBN93_11180) | - | 2345147..2345692 (-) | 546 | WP_234964379.1 | GNAT family N-acetyltransferase | - |
| GBN93_RS11105 | - | 2345704..2345853 (-) | 150 | WP_234964380.1 | hypothetical protein | - |
| GBN93_RS11110 (GBN93_11185) | - | 2345991..2346170 (+) | 180 | WP_234964381.1 | hypothetical protein | - |
| GBN93_RS11115 (GBN93_11190) | - | 2346258..2347130 (-) | 873 | WP_234964382.1 | KilA-N domain-containing protein | - |
| GBN93_RS11120 | - | 2347209..2347370 (-) | 162 | WP_234964383.1 | ribbon-helix-helix domain-containing protein | - |
| GBN93_RS11125 (GBN93_11195) | - | 2347475..2347798 (+) | 324 | WP_234964384.1 | Arc family DNA-binding protein | - |
| GBN93_RS11130 (GBN93_11200) | - | 2347805..2348020 (-) | 216 | WP_234964385.1 | hypothetical protein | - |
| GBN93_RS11135 (GBN93_11205) | - | 2348306..2348584 (-) | 279 | WP_234964386.1 | DUF2845 domain-containing protein | - |
| GBN93_RS11140 (GBN93_11210) | - | 2348655..2349221 (-) | 567 | WP_234964387.1 | hypothetical protein | - |
| GBN93_RS11145 | - | 2349218..2349376 (-) | 159 | WP_171264384.1 | hypothetical protein | - |
| GBN93_RS11150 (GBN93_11215) | - | 2349507..2350250 (-) | 744 | WP_234964388.1 | hypothetical protein | - |
| GBN93_RS11155 (GBN93_11220) | - | 2350243..2350422 (-) | 180 | WP_234964389.1 | hypothetical protein | - |
| GBN93_RS11160 (GBN93_11225) | - | 2350430..2350852 (-) | 423 | WP_234964390.1 | hypothetical protein | - |
| GBN93_RS11165 (GBN93_11230) | - | 2350827..2351324 (-) | 498 | WP_160362332.1 | phage virion morphogenesis protein | - |
| GBN93_RS11170 (GBN93_11235) | - | 2351332..2351775 (-) | 444 | WP_125273682.1 | gp436 family protein | - |
| GBN93_RS11175 (GBN93_11240) | - | 2351784..2352137 (-) | 354 | WP_234964391.1 | hypothetical protein | - |
| GBN93_RS11180 (GBN93_11245) | - | 2352148..2353224 (-) | 1077 | WP_062034622.1 | major capsid protein | - |
| GBN93_RS11185 (GBN93_11250) | - | 2353228..2353611 (-) | 384 | WP_062034623.1 | hypothetical protein | - |
| GBN93_RS11190 (GBN93_11255) | - | 2353611..2354579 (-) | 969 | WP_234964392.1 | hypothetical protein | - |
| GBN93_RS11195 (GBN93_11260) | - | 2354803..2356008 (-) | 1206 | WP_234964393.1 | phage minor head protein | - |
| GBN93_RS11200 (GBN93_11265) | - | 2356009..2357475 (-) | 1467 | WP_234964394.1 | DUF935 family protein | - |
| GBN93_RS11205 (GBN93_11270) | - | 2357488..2359164 (-) | 1677 | WP_234964395.1 | terminase | - |
| GBN93_RS11210 (GBN93_11275) | - | 2359161..2359667 (-) | 507 | WP_004693735.1 | DUF2280 domain-containing protein | - |
| GBN93_RS11215 (GBN93_11280) | - | 2359721..2360362 (-) | 642 | WP_234964396.1 | putative metallopeptidase | - |
| GBN93_RS11220 (GBN93_11285) | - | 2360322..2360759 (-) | 438 | WP_234964397.1 | endonuclease domain-containing protein | - |
| GBN93_RS11225 | - | 2361020..2361196 (-) | 177 | WP_191225556.1 | hypothetical protein | - |
| GBN93_RS11230 (GBN93_11290) | - | 2361907..2362728 (-) | 822 | WP_234964398.1 | hypothetical protein | - |
| GBN93_RS11235 (GBN93_11295) | - | 2362745..2363254 (-) | 510 | WP_234964399.1 | Panacea domain-containing protein | - |
| GBN93_RS11240 (GBN93_11300) | - | 2363498..2363986 (-) | 489 | WP_234964400.1 | hypothetical protein | - |
| GBN93_RS11245 (GBN93_11305) | - | 2363983..2364393 (-) | 411 | WP_234964401.1 | DUF559 domain-containing protein | - |
| GBN93_RS11250 (GBN93_11310) | - | 2364513..2364794 (-) | 282 | WP_234964402.1 | hypothetical protein | - |
| GBN93_RS11255 (GBN93_11315) | - | 2364791..2365279 (-) | 489 | WP_234964403.1 | hypothetical protein | - |
| GBN93_RS11260 (GBN93_11320) | - | 2365276..2366070 (-) | 795 | WP_234964404.1 | hypothetical protein | - |
| GBN93_RS11265 (GBN93_11325) | - | 2366067..2366942 (-) | 876 | WP_234964405.1 | replication protein | - |
| GBN93_RS11270 (GBN93_11330) | - | 2366947..2367297 (-) | 351 | WP_234964406.1 | hypothetical protein | - |
| GBN93_RS11275 (GBN93_11335) | - | 2367294..2367602 (-) | 309 | WP_234964407.1 | hypothetical protein | - |
| GBN93_RS11280 (GBN93_11340) | - | 2367599..2367889 (-) | 291 | WP_234964408.1 | hypothetical protein | - |
| GBN93_RS11285 (GBN93_11345) | - | 2367938..2368213 (-) | 276 | WP_130234757.1 | hypothetical protein | - |
| GBN93_RS11290 (GBN93_11350) | - | 2368224..2368460 (-) | 237 | WP_234964409.1 | helix-turn-helix domain-containing protein | - |
| GBN93_RS11295 (GBN93_11355) | - | 2368560..2369261 (+) | 702 | WP_234964410.1 | LexA family protein | - |
| GBN93_RS11300 (GBN93_11360) | - | 2369340..2369555 (+) | 216 | WP_234964411.1 | KTSC domain-containing protein | - |
| GBN93_RS11305 (GBN93_11365) | - | 2369583..2369885 (+) | 303 | WP_234964412.1 | hypothetical protein | - |
| GBN93_RS11310 (GBN93_11370) | - | 2370051..2370230 (+) | 180 | WP_234964413.1 | hypothetical protein | - |
| GBN93_RS11315 (GBN93_11375) | - | 2370290..2370682 (+) | 393 | WP_234964414.1 | putative four-helix membrane protein | - |
| GBN93_RS11320 (GBN93_11380) | - | 2370758..2371000 (+) | 243 | WP_234964415.1 | hypothetical protein | - |
| GBN93_RS11325 (GBN93_11385) | - | 2371001..2371213 (-) | 213 | WP_234964416.1 | hypothetical protein | - |
| GBN93_RS11330 (GBN93_11390) | - | 2371426..2371854 (+) | 429 | WP_234964417.1 | hypothetical protein | - |
| GBN93_RS11335 (GBN93_11395) | - | 2371854..2372159 (+) | 306 | WP_234964418.1 | hypothetical protein | - |
| GBN93_RS11340 (GBN93_11400) | - | 2372172..2373305 (+) | 1134 | WP_234964419.1 | ATP-binding protein | - |
| GBN93_RS11345 (GBN93_11405) | - | 2373436..2373678 (+) | 243 | WP_234964420.1 | hypothetical protein | - |
| GBN93_RS11350 (GBN93_11410) | - | 2373675..2373917 (+) | 243 | WP_148826331.1 | hypothetical protein | - |
| GBN93_RS11355 (GBN93_11415) | - | 2373921..2374520 (+) | 600 | WP_234964421.1 | HNH endonuclease signature motif containing protein | - |
| GBN93_RS11360 (GBN93_11420) | - | 2374520..2374726 (+) | 207 | WP_234964422.1 | hypothetical protein | - |
| GBN93_RS11365 (GBN93_11425) | - | 2374723..2375175 (+) | 453 | WP_234964423.1 | hypothetical protein | - |
| GBN93_RS11370 (GBN93_11430) | - | 2375175..2375396 (+) | 222 | WP_081316816.1 | hypothetical protein | - |
| GBN93_RS11375 (GBN93_11435) | - | 2375306..2376607 (-) | 1302 | WP_234964424.1 | tyrosine-type recombinase/integrase | - |
| GBN93_RS11380 (GBN93_11440) | - | 2376830..2377504 (+) | 675 | WP_234964425.1 | HAD-IA family hydrolase | - |
| GBN93_RS11385 (GBN93_11445) | - | 2377497..2377940 (+) | 444 | WP_004696588.1 | RNA-binding S4 domain-containing protein | - |
| GBN93_RS11390 (GBN93_11450) | recA | 2378055..2379098 (+) | 1044 | WP_005401034.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37602.01 Da Isoelectric Point: 5.0433
>NTDB_id=391956 GBN93_RS11390 WP_005401034.1 2378055..2379098(+) (recA) [Acinetobacter johnsonii strain AJ413]
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGDKIGQGKNNVIRHLEENPQLAETIEK
IIREKLLTTANAAPVEENEEEPDFLDA
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGDKIGQGKNNVIRHLEENPQLAETIEK
IIREKLLTTANAAPVEENEEEPDFLDA
Nucleotide
Download Length: 1044 bp
>NTDB_id=391956 GBN93_RS11390 WP_005401034.1 2378055..2379098(+) (recA) [Acinetobacter johnsonii strain AJ413]
ATGGATGATAATAAAAGCAAGGCGCTCAATGCTGCGCTAAGCCAAATTGAAAAGCAGTTTGGTAAAAACACAGTAATGCG
TCTTGGCGATAACACCGTACAAGCTGTTGAAGCGGTATCAACGGGTTCTTTGACACTTGATATTGCTCTAGGCATTGGCG
GCTTACCGAAAGGTCGTATCGTTGAGATTTATGGTCCTGAATCTTCAGGCAAAACAACCATGACTTTACAAGCGATTGCC
GAATGTCAAAAAGCAGGTGGTACATGTGCATTTATCGATGCAGAACACGCTTTAGACCCACAGTATGCGCGTAAACTTGG
CGTAGATATTGACAATCTACTGGTTTCTCAGCCCGACCATGGTGAGCAAGCACTTGAAATTGCAGACATGCTGGTTCGCT
CTGGTGCCATTGACCTCATCGTTGTCGACTCTGTTGCAGCATTGACACCACGTGCAGAAATTGAAGGTGAAATGGGCGAC
TCACACATGGGCCTCCAGGCACGTTTAATGAGCCAAGCATTACGTAAAATTACAGGTAATGCAAAACGTTCAAACTGTAT
GGTAATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCTGAAACCACGACTGGTGGTAATGCAT
TGAAATTCTATGCGTCTGTGCGTTTAGACATTCGCCGCGTAGGTCAGGTCAAAGAAGGCGATGAAATCGTTGGTTCTGAA
ACCAAAGTAAAAGTTGTCAAAAACAAAATGGCACCTCCATTCCGCGAAGCGCTCTTCCAAATCCTATATGGTAAAGGCGT
CAACCACTTGGGTGAACTTGTAGACTTGGCTGTTCAACAAGAAATCGTACAAAAAGCAGGTGCTTGGTATTCATACCAAG
GTGATAAAATTGGTCAAGGTAAAAACAATGTAATCCGTCACCTTGAAGAAAACCCTCAGTTGGCTGAAACCATTGAGAAA
ATCATTCGAGAAAAACTACTGACGACCGCAAACGCTGCGCCTGTAGAAGAGAATGAAGAAGAGCCAGACTTTTTAGATGC
TTAA
ATGGATGATAATAAAAGCAAGGCGCTCAATGCTGCGCTAAGCCAAATTGAAAAGCAGTTTGGTAAAAACACAGTAATGCG
TCTTGGCGATAACACCGTACAAGCTGTTGAAGCGGTATCAACGGGTTCTTTGACACTTGATATTGCTCTAGGCATTGGCG
GCTTACCGAAAGGTCGTATCGTTGAGATTTATGGTCCTGAATCTTCAGGCAAAACAACCATGACTTTACAAGCGATTGCC
GAATGTCAAAAAGCAGGTGGTACATGTGCATTTATCGATGCAGAACACGCTTTAGACCCACAGTATGCGCGTAAACTTGG
CGTAGATATTGACAATCTACTGGTTTCTCAGCCCGACCATGGTGAGCAAGCACTTGAAATTGCAGACATGCTGGTTCGCT
CTGGTGCCATTGACCTCATCGTTGTCGACTCTGTTGCAGCATTGACACCACGTGCAGAAATTGAAGGTGAAATGGGCGAC
TCACACATGGGCCTCCAGGCACGTTTAATGAGCCAAGCATTACGTAAAATTACAGGTAATGCAAAACGTTCAAACTGTAT
GGTAATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCTGAAACCACGACTGGTGGTAATGCAT
TGAAATTCTATGCGTCTGTGCGTTTAGACATTCGCCGCGTAGGTCAGGTCAAAGAAGGCGATGAAATCGTTGGTTCTGAA
ACCAAAGTAAAAGTTGTCAAAAACAAAATGGCACCTCCATTCCGCGAAGCGCTCTTCCAAATCCTATATGGTAAAGGCGT
CAACCACTTGGGTGAACTTGTAGACTTGGCTGTTCAACAAGAAATCGTACAAAAAGCAGGTGCTTGGTATTCATACCAAG
GTGATAAAATTGGTCAAGGTAAAAACAATGTAATCCGTCACCTTGAAGAAAACCCTCAGTTGGCTGAAACCATTGAGAAA
ATCATTCGAGAAAAACTACTGACGACCGCAAACGCTGCGCCTGTAGAAGAGAATGAAGAAGAGCCAGACTTTTTAGATGC
TTAA
Similar proteins
Only experimentally validated proteins are listed.