Detailed information NTG0391909

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GBN68_RS06090
• Genome accession: NZ_CP045101
• Coordinates: 1291727..1292770 (-)
• Length: 347 a.a.
• NCBI ID: WP_005401034.1
• Uniprot ID: A0A1T1JM42
• Organism: Acinetobacter johnsonii strain AJ210
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1290013..1290759	1291727..1292770	flank	968

Gene organization within MGE regions

Location: 1290013..1292770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GBN68_RS06080 (GBN68_06110)	-	1290013..1290759 (+)	747	WP_004645384.1	IS5-like element ISAba31 family transposase	-
GBN68_RS06085 (GBN68_06115)	-	1291018..1291620 (-)	603	WP_234955912.1	regulatory protein RecX	-
GBN68_RS06090 (GBN68_06120)	recA	1291727..1292770 (-)	1044	WP_005401034.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37602.01 Da
• Isoelectric Point: 5.0433

>NTDB_id=391909 GBN68_RS06090 WP_005401034.1 1291727..1292770(-) (recA) [Acinetobacter johnsonii strain AJ210]
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGDKIGQGKNNVIRHLEENPQLAETIEK
IIREKLLTTANAAPVEENEEEPDFLDA

Nucleotide

• Length: 1044 bp

>NTDB_id=391909 GBN68_RS06090 WP_005401034.1 1291727..1292770(-) (recA) [Acinetobacter johnsonii strain AJ210]
ATGGATGATAATAAAAGCAAGGCGCTCAATGCTGCGCTAAGCCAAATTGAAAAACAGTTTGGTAAAAACACAGTAATGCG
TCTTGGCGATAACACCGTACAAGCTGTTGAAGCGGTATCAACGGGTTCTTTGACACTTGATATTGCACTAGGCATTGGCG
GCTTACCGAAAGGTCGTATCGTTGAGATTTATGGTCCTGAATCTTCAGGTAAAACAACCATGACTTTACAAGCGATTGCC
GAATGTCAAAAAGCAGGTGGTACATGTGCATTTATCGATGCAGAACACGCTTTAGACCCACAGTATGCGCGTAAACTTGG
CGTAGATATTGATAATCTCTTGGTTTCTCAGCCCGACCATGGTGAACAAGCACTTGAAATTGCAGACATGCTGGTTCGCT
CTGGTGCTATTGACCTCATCGTTGTCGATTCTGTTGCAGCATTGACACCACGTGCGGAAATTGAAGGTGAAATGGGCGAC
TCGCACATGGGGCTCCAAGCACGTTTAATGAGCCAAGCATTACGTAAAATTACAGGTAATGCAAAACGTTCAAACTGTAT
GGTGATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCTGAAACCACGACTGGTGGTAATGCGT
TGAAATTCTATGCGTCTGTGCGTTTAGACATTCGTCGCGTAGGTCAGGTCAAAGAAGGCGATGAAATCGTTGGTTCTGAA
ACCAAAGTAAAAGTTGTCAAAAACAAAATGGCACCTCCATTCCGCGAAGCGCTTTTCCAAATCCTATATGGTAAAGGCGT
CAACCACTTGGGCGAACTTGTAGACTTAGCTGTTCAACAAGAAATCGTACAAAAAGCAGGTGCTTGGTATTCATACCAAG
GTGATAAAATTGGTCAAGGTAAAAACAATGTGATCCGTCACCTTGAAGAAAACCCTCAGTTGGCTGAAACCATTGAGAAA
ATCATTCGAGAAAAACTACTGACGACTGCAAACGCTGCGCCTGTAGAAGAGAATGAAGAAGAGCCAGACTTTTTAGATGC
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A1T1JM42

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	91.691	100	0.922
recA	Acinetobacter baumannii D1279779	91.04	99.712	0.908
recA	Pseudomonas stutzeri DSM 10701	74.063	100	0.741
recA	Vibrio cholerae strain A1552	71.429	98.847	0.706
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.429	98.847	0.706
recA	Glaesserella parasuis strain SC1401	68.314	99.135	0.677
recA	Ralstonia pseudosolanacearum GMI1000	70.732	94.524	0.669
recA	Neisseria gonorrhoeae MS11	68.21	93.372	0.637
recA	Neisseria gonorrhoeae MS11	68.21	93.372	0.637
recA	Neisseria gonorrhoeae strain FA1090	68.21	93.372	0.637
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.865	98.559	0.62
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.35	95.389	0.614
recA	Helicobacter pylori strain NCTC11637	62.202	96.83	0.602
recA	Helicobacter pylori 26695	61.905	96.83	0.599
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.094	94.813	0.579
recA	Streptococcus pneumoniae R6	61.656	93.948	0.579
recA	Streptococcus pneumoniae Rx1	61.656	93.948	0.579
recA	Streptococcus pneumoniae D39	61.656	93.948	0.579
recA	Streptococcus pneumoniae TIGR4	61.656	93.948	0.579
recA	Streptococcus pyogenes NZ131	61.28	94.524	0.579
recA	Bacillus subtilis subsp. subtilis str. 168	62.305	92.507	0.576
recA	Streptococcus mutans UA159	61.538	93.66	0.576
recA	Streptococcus mitis SK321	61.3	93.084	0.571
recA	Streptococcus mitis NCTC 12261	61.3	93.084	0.571
recA	Latilactobacillus sakei subsp. sakei 23K	57.567	97.118	0.559
recA	Lactococcus lactis subsp. cremoris KW2	58.514	93.084	0.545