Detailed information NTG0391738

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GAN20_RS00295
• Genome accession: NZ_CP045085
• Coordinates: 64539..65582 (+)
• Length: 347 a.a.
• NCBI ID: WP_014614049.1
• Uniprot ID: A0A166NCN9
• Organism: Staphylococcus pseudintermedius strain KCTC 43135
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 59539..70582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GAN20_RS00270	ymfI	60358..61062 (+)	705	WP_037543163.1	elongation factor P 5-aminopentanone reductase	-
GAN20_RS00275	-	61119..61964 (+)	846	WP_014614053.1	DUF3388 domain-containing protein	-
GAN20_RS00280	-	61983..62378 (+)	396	WP_014614052.1	helix-turn-helix domain-containing protein	-
GAN20_RS00285	pgsA	62420..63004 (+)	585	WP_096548680.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
GAN20_RS00290	-	63225..64400 (+)	1176	WP_110160836.1	CinA family nicotinamide mononucleotide deamidase-related protein	-
GAN20_RS00295	recA	64539..65582 (+)	1044	WP_014614049.1	recombinase RecA	Machinery gene
GAN20_RS00300	rny	65809..67368 (+)	1560	WP_014614047.1	ribonuclease Y	-
GAN20_RS00305	-	67491..67709 (-)	219	WP_014614046.1	hypothetical protein	-
GAN20_RS00310	-	67907..68287 (+)	381	WP_096535761.1	ArsR/SmtB family transcription factor	-
GAN20_RS00315	-	68271..70445 (+)	2175	WP_152162977.1	heavy metal translocating P-type ATPase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37942.97 Da
• Isoelectric Point: 5.0169

>NTDB_id=391738 GAN20_RS00295 WP_014614049.1 64539..65582(+) (recA) [Staphylococcus pseudintermedius strain KCTC 43135]
MDNERQKALDTVIKNMEKSFGKGAVMKLGENKDRRVSSVSSGSVTLDHALGVGGYPKGRIIEVYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAEALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIIVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSAAISKSKTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFKVAEVDIMYGKGISREGELIDLGVQYDIVDKSGAWYSYNGERMGQGKENVKQFLLENPKLEDEIDR
KLREKLGIYDGDVEESEQEETQTLFDE

Nucleotide

• Length: 1044 bp

>NTDB_id=391738 GAN20_RS00295 WP_014614049.1 64539..65582(+) (recA) [Staphylococcus pseudintermedius strain KCTC 43135]
TTGGATAATGAACGTCAAAAAGCGCTAGATACAGTAATTAAAAACATGGAAAAATCATTTGGTAAAGGTGCCGTAATGAA
ACTGGGCGAGAATAAAGATCGCCGTGTTTCAAGTGTTTCAAGTGGTTCGGTAACGCTAGACCATGCATTAGGGGTTGGCG
GCTATCCTAAAGGTCGTATCATCGAAGTTTATGGCCCCGAAAGTTCTGGTAAAACAACGGTTGCTTTACATGCCATTGCT
GAAGTACAAAAAAATGGCGGTGTTGCCGCATTTATTGATGCCGAACACGCACTCGATCCAGTTTACGCTGAAGCATTAGG
TGTAGATATTGATAACTTATACCTTTCACAACCAGACCACGGGGAACAAGGTCTTGAAATTGCAGAGGCGTTTGTCAGAA
GTGGCGCAGTGGATATTATCATTGTTGACTCAGTTGCGGCATTGACTCCTAAAGCTGAAATTGAAGGTGAAATGGGTGAT
ACGCATGTTGGTTTACAAGCGCGTTTAATGTCTCAAGCATTGCGTAAACTTTCTGCAGCCATTTCAAAATCAAAAACAAC
AGCTATCTTTATTAACCAAATTCGTGAAAAAGTAGGCGTTATGTTCGGTAACCCTGAAACGACACCAGGGGGCCGAGCTC
TGAAATTCTACAGCTCAGTTCGTTTAGAAGTGCGTCGTGCTGAACAATTGAAACAAGGTCAAGATATTGTAGGTAACCGT
ACTAAAATTAAAGTGGTTAAAAATAAAGTCGCACCACCATTCAAAGTCGCAGAAGTGGATATCATGTATGGTAAAGGGAT
TTCACGCGAAGGAGAATTGATTGATTTAGGTGTACAATACGACATCGTTGATAAATCAGGTGCTTGGTATTCATATAACG
GTGAGCGTATGGGTCAAGGTAAAGAGAATGTAAAACAATTTCTACTTGAAAACCCTAAACTTGAAGATGAAATTGACCGT
AAATTACGTGAAAAACTCGGCATTTATGATGGTGATGTAGAAGAATCTGAACAAGAAGAAACACAAACGCTTTTTGATGA
ATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A166NCN9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	76.994	93.948	0.723
recA	Latilactobacillus sakei subsp. sakei 23K	69.828	100	0.7
recA	Streptococcus mutans UA159	65.903	100	0.663
recA	Streptococcus pyogenes NZ131	69.909	94.813	0.663
recA	Streptococcus pneumoniae D39	65.517	100	0.657
recA	Streptococcus pneumoniae R6	65.517	100	0.657
recA	Streptococcus pneumoniae TIGR4	65.517	100	0.657
recA	Streptococcus pneumoniae Rx1	65.517	100	0.657
recA	Streptococcus mitis NCTC 12261	65.598	98.847	0.648
recA	Streptococcus mitis SK321	65.306	98.847	0.646
recA	Acinetobacter baumannii D1279779	62.644	100	0.628
recA	Lactococcus lactis subsp. cremoris KW2	65.559	95.389	0.625
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.636	98.271	0.625
recA	Neisseria gonorrhoeae MS11	62.281	98.559	0.614
recA	Neisseria gonorrhoeae MS11	62.281	98.559	0.614
recA	Neisseria gonorrhoeae strain FA1090	62.281	98.559	0.614
recA	Acinetobacter baylyi ADP1	64.724	93.948	0.608
recA	Helicobacter pylori 26695	63.11	94.524	0.597
recA	Helicobacter pylori strain NCTC11637	62.805	94.524	0.594
recA	Vibrio cholerae strain A1552	63.19	93.948	0.594
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.19	93.948	0.594
recA	Ralstonia pseudosolanacearum GMI1000	64.856	90.202	0.585
recA	Pseudomonas stutzeri DSM 10701	61.656	93.948	0.579
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	95.389	0.576
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.382	91.931	0.573
recA	Glaesserella parasuis strain SC1401	60.991	93.084	0.568