Detailed information NTG0039089

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CALNI_RS00500
• Genome accession: NC_014758
• Coordinates: 97000..98001 (+)
• Length: 333 a.a.
• NCBI ID: WP_013450232.1
• Uniprot ID: E4TIR0
• Organism: Calditerrivibrio nitroreducens DSM 19672
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 92000..103001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CALNI_RS00485 (Calni_0097)	-	92756..94468 (+)	1713	WP_013450229.1	nickel-dependent hydrogenase large subunit	-
CALNI_RS00490 (Calni_0098)	cybH	94479..95156 (+)	678	WP_013450230.1	Ni/Fe-hydrogenase, b-type cytochrome subunit	-
CALNI_RS00495 (Calni_0099)	-	95271..96893 (+)	1623	WP_013450231.1	HAMP domain-containing methyl-accepting chemotaxis protein	-
CALNI_RS00500 (Calni_0100)	recA	97000..98001 (+)	1002	WP_013450232.1	recombinase RecA	Machinery gene
CALNI_RS00505 (Calni_0101)	-	98102..99202 (+)	1101	WP_013450233.1	type IV pilus twitching motility protein PilT	-
CALNI_RS00510 (Calni_0102)	-	99192..99632 (+)	441	WP_013450234.1	RecX family transcriptional regulator	-
CALNI_RS00515 (Calni_0103)	rplI	99613..100059 (+)	447	WP_013450235.1	50S ribosomal protein L9	-
CALNI_RS00520 (Calni_0104)	dnaB	100046..101377 (+)	1332	WP_013450236.1	replicative DNA helicase	-
CALNI_RS00525 (Calni_0105)	lpxC	101489..102418 (+)	930	WP_013450237.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
CALNI_RS00530 (Calni_0106)	-	102449..102895 (-)	447	WP_013450238.1	hypothetical protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 35752.35 Da
• Isoelectric Point: 6.7541

>NTDB_id=39089 CALNI_RS00500 WP_013450232.1 97000..98001(+) (recA) [Calditerrivibrio nitroreducens DSM 19672]
MDNEKLKALDAALSKIEKDFGKGAVMKLGDKAIEKPPVIPTGILTLDAALGVGGIPRGRIIEIFGSESSGKTTVAFHMIA
EAQKLGGIAAFIDAEHAMDPVYAKAIGVDVDNLFVSQPDNGEAALEIAETLVRSGAIDIIVIDSVAALTPKAEIEGDMGD
SFMGLQARLMSQALRKLTAIVNKSKTALVFINQTRQKIGISYGNPETTTGGNALKFYATIRIEVKRSGHLKDKEENVGSE
TVAKVVKNKVAPPFKQAKFDILYGTGVSKEGILIDLGVEEGLIGKSGAWFSYKDTKIGQGKENARQYLKDNPEIMKEIEL
EIRKKLGLPLVEN

Nucleotide

• Length: 1002 bp

>NTDB_id=39089 CALNI_RS00500 WP_013450232.1 97000..98001(+) (recA) [Calditerrivibrio nitroreducens DSM 19672]
ATGGACAATGAGAAATTAAAAGCCCTTGATGCTGCCCTTAGCAAGATAGAAAAAGATTTTGGCAAAGGGGCTGTAATGAA
ATTAGGTGATAAAGCGATTGAAAAACCACCTGTTATCCCCACCGGTATACTCACACTGGATGCGGCGTTGGGGGTTGGGG
GTATTCCTCGGGGTAGAATTATTGAAATATTTGGCAGTGAGTCTAGTGGTAAGACGACAGTTGCGTTTCATATGATAGCC
GAAGCACAAAAACTGGGTGGTATAGCCGCCTTTATAGATGCCGAACACGCAATGGATCCTGTTTATGCAAAGGCTATAGG
GGTTGATGTGGATAATCTTTTTGTAAGTCAGCCGGACAACGGAGAAGCAGCCCTTGAGATTGCCGAAACTCTTGTGAGGA
GTGGAGCTATCGATATCATAGTGATAGACTCTGTGGCAGCCCTTACCCCTAAAGCGGAGATAGAAGGGGATATGGGGGAT
TCTTTTATGGGTCTTCAGGCACGACTTATGAGTCAGGCATTGAGAAAGCTTACAGCAATTGTGAATAAATCCAAGACAGC
CCTTGTGTTTATAAACCAAACAAGACAAAAGATAGGAATATCATACGGAAACCCTGAGACAACTACTGGTGGTAATGCAC
TGAAGTTTTACGCCACAATTAGAATTGAAGTTAAAAGATCGGGTCATTTAAAAGATAAAGAGGAGAATGTGGGAAGTGAA
ACTGTGGCAAAAGTTGTCAAAAATAAAGTAGCACCACCTTTTAAGCAGGCTAAATTTGATATTTTATATGGTACAGGTGT
ATCCAAGGAAGGGATATTGATAGATCTGGGTGTTGAAGAGGGATTAATAGGGAAGTCAGGAGCCTGGTTTAGCTATAAGG
ATACCAAGATTGGGCAGGGGAAAGAGAACGCCAGACAGTACCTCAAAGATAATCCGGAAATTATGAAAGAGATTGAATTG
GAGATACGAAAAAAACTTGGTTTACCATTGGTGGAAAACTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: E4TIR0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	63.444	99.399	0.631
recA	Neisseria gonorrhoeae MS11	63.444	99.399	0.631
recA	Neisseria gonorrhoeae strain FA1090	63.444	99.399	0.631
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.918	98.799	0.622
recA	Acinetobacter baumannii D1279779	63.19	97.898	0.619
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.934	99.399	0.616
recA	Acinetobacter baylyi ADP1	62.883	97.898	0.616
recA	Bacillus subtilis subsp. subtilis str. 168	62.27	97.898	0.61
recA	Pseudomonas stutzeri DSM 10701	62.27	97.898	0.61
recA	Vibrio cholerae O1 biovar El Tor strain E7946	61.702	98.799	0.61
recA	Vibrio cholerae strain A1552	61.702	98.799	0.61
recA	Glaesserella parasuis strain SC1401	62.848	96.997	0.61
recA	Streptococcus mitis NCTC 12261	61.094	98.799	0.604
recA	Helicobacter pylori strain NCTC11637	60.976	98.498	0.601
recA	Helicobacter pylori 26695	60.976	98.498	0.601
recA	Streptococcus mitis SK321	60.79	98.799	0.601
recA	Streptococcus pneumoniae Rx1	60.79	98.799	0.601
recA	Streptococcus pneumoniae D39	60.79	98.799	0.601
recA	Streptococcus pneumoniae R6	60.79	98.799	0.601
recA	Streptococcus pneumoniae TIGR4	60.79	98.799	0.601
recA	Streptococcus mutans UA159	59.697	99.099	0.592
recA	Streptococcus pyogenes NZ131	59.271	98.799	0.586
recA	Ralstonia pseudosolanacearum GMI1000	61.981	93.994	0.583
recA	Lactococcus lactis subsp. cremoris KW2	58.359	98.799	0.577
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.688	96.096	0.574
recA	Latilactobacillus sakei subsp. sakei 23K	58.589	97.898	0.574