Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   NMBNZ0533_RS01675 Genome accession   NC_017518
Coordinates   306131..306826 (+) Length   231 a.a.
NCBI ID   WP_002248140.1    Uniprot ID   -
Organism   Neisseria meningitidis NZ-05/33     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 301131..311826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBNZ0533_RS01655 (NMBNZ0533_0293) - 301754..302152 (+) 399 WP_002216361.1 DoxX family protein -
  NMBNZ0533_RS01660 (NMBNZ0533_0294) - 302201..302806 (+) 606 WP_002230218.1 nitroreductase family protein -
  NMBNZ0533_RS01665 (NMBNZ0533_0295) - 302992..305103 (+) 2112 Protein_297 TonB-dependent receptor -
  NMBNZ0533_RS01670 (NMBNZ0533_0296) - 305301..305960 (+) 660 WP_002218694.1 NYN domain-containing protein -
  NMBNZ0533_RS01675 (NMBNZ0533_0297) dsbA2 306131..306826 (+) 696 WP_002248140.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMBNZ0533_RS01680 (NMBNZ0533_0298) - 306903..307868 (-) 966 WP_014580965.1 IS30-like element IS1655 family transposase -
  NMBNZ0533_RS01685 (NMBNZ0533_0299) ffh 308240..309610 (-) 1371 WP_014581243.1 signal recognition particle protein -
  NMBNZ0533_RS01690 (NMBNZ0533_0300) - 309830..310634 (+) 805 Protein_302 inner membrane protein YpjD -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25378.89 Da        Isoelectric Point: 5.3625

>NTDB_id=39089 NMBNZ0533_RS01675 WP_002248140.1 306131..306826(+) (dsbA2) [Neisseria meningitidis NZ-05/33]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAPLTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEASESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=39089 NMBNZ0533_RS01675 WP_002248140.1 306131..306826(+) (dsbA2) [Neisseria meningitidis NZ-05/33]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCCACGCCTATCCCGCAACAGCAGGCCGGCAAAGTCGAAGTCTTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTTCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterProScan.

(64-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

97.835

100

0.978

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment