Detailed information NTG0386609

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: F1728_RS08535
• Genome accession: NZ_CP043930
• Coordinates: 2259113..2260213 (+)
• Length: 366 a.a.
• NCBI ID: WP_155363753.1
• Uniprot ID: A0A6I6A9S5
• Organism: Gimesia benthica strain E7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2254113..2265213

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F1728_RS08520 (F1728_08465)	-	2255079..2256311 (+)	1233	WP_145037517.1	DUF1573 domain-containing protein	-
F1728_RS08525 (F1728_08470)	-	2256514..2258202 (+)	1689	WP_155363751.1	multiheme c-type cytochrome	-
F1728_RS08530 (F1728_08475)	cyaB	2258214..2258816 (+)	603	WP_155363752.1	class IV adenylate cyclase	-
F1728_RS08535 (F1728_08480)	recA	2259113..2260213 (+)	1101	WP_155363753.1	recombinase RecA	Machinery gene
F1728_RS08540 (F1728_08485)	-	2260404..2262002 (+)	1599	WP_155363754.1	trypsin-like peptidase domain-containing protein	-
F1728_RS08545 (F1728_08490)	alaS	2262009..2264636 (+)	2628	WP_155363755.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 39120.95 Da
• Isoelectric Point: 6.5216

>NTDB_id=386609 F1728_RS08535 WP_155363753.1 2259113..2260213(+) (recA) [Gimesia benthica strain E7]
MAAKARSKRAATPPAPSNNGTKDSEGMLKNALGQIEQAFGKGSIMKLTGENARAVPSIASGALSLDLALGGHGFPRGRII
ELYGPESSGKTTLALHVIANAQKEGGIAAFIDAEHALDPVWAKKLGVNISELLVSQPTYGEEGLQIAEMLIKSNSVDVIV
VDSVAALVPKAELDGEIGDSHVGLQARMMSQAMRKLTGAISKSKTTVIFINQIREKIGVMFGSPETTPGGRALKFYSSVR
VDVRRIATLKDGDTVTGIRMKAKIVKNKIAPPFRIAEFDMLSTGGINFELDLLDLAVENKIVKKSGSWFSYGETRLGQGR
DRSKAVLEENPELCLEIKQKVLEAQGLVASTEEELEPETEPEAVEA

Nucleotide

• Length: 1101 bp

>NTDB_id=386609 F1728_RS08535 WP_155363753.1 2259113..2260213(+) (recA) [Gimesia benthica strain E7]
ATGGCCGCTAAAGCAAGATCAAAACGGGCTGCTACCCCTCCCGCTCCCAGCAATAATGGAACCAAAGATTCCGAGGGGAT
GCTCAAAAACGCATTGGGACAAATCGAACAGGCGTTCGGTAAAGGCTCCATCATGAAACTCACCGGGGAAAACGCCCGCG
CGGTCCCCTCGATCGCCAGCGGTGCCCTGTCCCTTGACCTGGCCCTCGGAGGCCATGGATTTCCCCGTGGCCGTATTATC
GAACTCTACGGACCGGAATCCAGCGGTAAAACCACCCTGGCCCTGCACGTTATCGCCAACGCCCAGAAAGAGGGTGGCAT
CGCCGCGTTTATCGACGCCGAGCATGCTCTCGATCCCGTCTGGGCCAAAAAACTGGGCGTCAACATCTCCGAACTGCTGG
TCAGTCAGCCGACCTACGGCGAAGAAGGCCTGCAGATTGCTGAAATGCTGATCAAATCCAATTCGGTCGATGTCATCGTT
GTCGACTCGGTCGCTGCCCTGGTCCCGAAGGCGGAACTGGATGGCGAAATCGGTGACTCACACGTCGGCCTGCAGGCACG
TATGATGAGTCAGGCCATGCGGAAACTGACCGGTGCCATTTCCAAATCCAAAACCACGGTGATCTTCATCAACCAGATCC
GTGAAAAGATTGGCGTCATGTTCGGCAGCCCCGAAACGACTCCCGGCGGTCGCGCATTGAAGTTCTACAGTTCCGTTCGC
GTTGACGTCCGTCGTATCGCGACACTCAAAGACGGTGACACGGTGACCGGCATTCGCATGAAAGCCAAGATCGTCAAGAA
CAAAATTGCACCTCCGTTCCGCATTGCTGAGTTTGACATGCTCTCCACCGGAGGCATCAATTTCGAACTCGACCTGCTGG
ACCTTGCCGTGGAAAACAAAATCGTCAAGAAGAGCGGCAGCTGGTTCAGCTATGGTGAAACGCGACTGGGTCAGGGTCGG
GACCGTTCCAAAGCGGTGCTCGAGGAAAACCCCGAACTCTGTCTGGAGATTAAACAGAAGGTCCTGGAAGCCCAGGGGCT
GGTTGCCTCCACCGAGGAAGAACTGGAACCGGAAACAGAACCGGAAGCCGTCGAGGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (28-287)

3D structure

• AlphaFold DB: A0A6I6A9S5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	64	88.798	0.568
recA	Lactococcus lactis subsp. cremoris KW2	61.398	89.891	0.552
recA	Streptococcus pneumoniae D39	59.064	93.443	0.552
recA	Streptococcus pneumoniae Rx1	59.064	93.443	0.552
recA	Streptococcus pneumoniae R6	59.064	93.443	0.552
recA	Streptococcus pneumoniae TIGR4	59.064	93.443	0.552
recA	Streptococcus mitis NCTC 12261	59.337	90.71	0.538
recA	Streptococcus mitis SK321	59.337	90.71	0.538
recA	Streptococcus mutans UA159	56.522	94.262	0.533
recA	Latilactobacillus sakei subsp. sakei 23K	57.567	92.077	0.53
recA	Pseudomonas stutzeri DSM 10701	58.258	90.984	0.53
recA	Acinetobacter baylyi ADP1	56.14	93.443	0.525
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.704	90.437	0.522
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.127	86.339	0.519
recA	Vibrio cholerae strain A1552	60.127	86.339	0.519
recA	Acinetobacter baumannii D1279779	56.38	92.077	0.519
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	58.104	89.344	0.519
recA	Helicobacter pylori 26695	55.718	93.169	0.519
recA	Neisseria gonorrhoeae MS11	56.757	90.984	0.516
recA	Neisseria gonorrhoeae MS11	56.757	90.984	0.516
recA	Neisseria gonorrhoeae strain FA1090	56.757	90.984	0.516
recA	Streptococcus pyogenes NZ131	59.434	86.885	0.516
recA	Helicobacter pylori strain NCTC11637	55.425	93.169	0.516
recA	Ralstonia pseudosolanacearum GMI1000	60.383	85.519	0.516
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.193	90.437	0.508
recA	Glaesserella parasuis strain SC1401	58.599	85.792	0.503