Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NMBB_RS10750 Genome accession   NC_017505
Coordinates   2075858..2076826 (+) Length   322 a.a.
NCBI ID   WP_014575592.1    Uniprot ID   -
Organism   Neisseria meningitidis alpha710     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2070858..2081826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBB_RS10740 (NMBB_2284) fetA 2072085..2074256 (+) 2172 WP_014575590.1 TonB-dependent siderophore receptor FetA/FrpB -
  NMBB_RS10745 (NMBB_2285) - 2074560..2075525 (+) 966 WP_002224139.1 siderophore ABC transporter substrate-binding protein -
  NMBB_RS15050 (NMBB_2286) - 2075543..2075839 (+) 297 WP_162488688.1 hypothetical protein -
  NMBB_RS10750 (NMBB_2287) ceuB 2075858..2076826 (+) 969 WP_014575592.1 ABC transporter permease Machinery gene
  NMBB_RS10755 (NMBB_2288) - 2076816..2077790 (+) 975 WP_002219909.1 iron chelate uptake ABC transporter family permease subunit -
  NMBB_RS10760 (NMBB_2289) - 2077835..2078461 (+) 627 WP_002219910.1 FmdE family protein -
  NMBB_RS10765 (NMBB_2290) - 2078545..2079294 (+) 750 WP_002219911.1 ABC transporter ATP-binding protein -
  NMBB_RS10770 (NMBB_2291) - 2079353..2079691 (-) 339 WP_002214902.1 P-II family nitrogen regulator -
  NMBB_RS13465 (NMBB_2292) - 2079786..2079998 (+) 213 WP_003710665.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 34367.60 Da        Isoelectric Point: 10.0891

>NTDB_id=38643 NMBB_RS10750 WP_014575592.1 2075858..2076826(+) (ceuB) [Neisseria meningitidis alpha710]
MTAKPFSLNLTNLLLLAALFAVSLSVGVADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
VTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLGASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAH
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=38643 NMBB_RS10750 WP_014575592.1 2075858..2076826(+) (ceuB) [Neisseria meningitidis alpha710]
ATGACTGCCAAACCTTTTTCCCTCAACCTGACCAACCTCCTGCTGCTGGCGGCGTTGTTTGCCGTCAGCCTGTCGGTGGG
CGTTGCCGATTTCCGCTGGTCGGATGTGTTTTCGCTGTCCGACAGCCAGCAAGTGATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGTTGACGGGCGCGTCGATGGCGGTGGCGGGGATGATTATGCAGATTTTGATGCGTAACCGTTTTGTC
GAGCCTTCTATGGCGGGCGCGGGTCAGAGTGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCGCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGCTGATCGGGATGCTGGTGTTTATGCTGCTGATCCGCCGTCTGCCGC
CGACGGCGCAACTGATGGTGCCGCTGGTGGGGATTATTTTCGGCGGCGTGGTTGAGGCAGTGGCGACGTTTATCGCGTAT
GAAAACGAAATGCTGCAAATGCTCGGCGTGTGGCAGCAGGGCGATTTTTCGAGCGTGCTGCTGGGGCGGTACGAGCTGCT
TTGGATTACGGGCGGTTTGGCGGTGTTTGCCTATCTGATTGCCGACCGGCTGACGATTTTGGGGCTGGGCGAGACGGTCA
GCGTGAATTTGGGTTTGAACCGGACGGCGGTGTTGTGGTCGGGGCTGATTATTGTGGCTTTGATTACGTCGCTGGTTATC
GTTACGGTCGGCAATATTCCGTTTGTCGGGCTGGTCGTGCCGAACATCATCAGCCGCCTGATAGGCGACAGGCTGCGCCA
AAGCCTGCCTGCGGTGGCCTTGTTGGGCGCGTCTTTGGTTTTATTGTGCGACATTATCGGACGTGTGATTGTGTTTCCGT
TTGAAATTCCGGTCTCTACGGTTTTTGGTGTGTTGGGTACGGCTTTGTTTTTGTGGCTTTTGTTAAGGAAACCTGCTCAT
GCCGTCTGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.528

93.478

0.388

Multiple sequence alignment