Detailed information NTG0384600

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: F0U60_RS42320
• Genome accession: NZ_CP043494
• Coordinates: 10340319..10341413 (-)
• Length: 364 a.a.
• NCBI ID: WP_395808610.1
• Uniprot ID: -
• Organism: Archangium minus strain Cbm 6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 10335319..10346413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F0U60_RS42310 (F0U60_42255)	-	10335832..10338525 (-)	2694	WP_395808606.1	M28 family peptidase	-
F0U60_RS42315 (F0U60_42260)	-	10338702..10340138 (-)	1437	WP_395808608.1	glycosyltransferase family 39 protein	-
F0U60_RS42320 (F0U60_42265)	recA	10340319..10341413 (-)	1095	WP_395808610.1	recombinase RecA	Machinery gene
F0U60_RS42325 (F0U60_42270)	-	10341522..10342259 (-)	738	WP_395808612.1	hypothetical protein	-
F0U60_RS42330 (F0U60_42275)	-	10342473..10343441 (+)	969	WP_395808614.1	serine/threonine-protein kinase	-
F0U60_RS42335 (F0U60_42280)	-	10343937..10346339 (+)	2403	WP_395825680.1	ribonucleoside-diphosphate reductase subunit alpha	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 39117.90 Da
• Isoelectric Point: 7.3839

>NTDB_id=384600 F0U60_RS42320 WP_395808610.1 10340319..10341413(-) (recA) [Archangium minus strain Cbm 6]
MAVNPEKEKAIELAMSAVERQFGKGSIMRLGNEEPLVRDVQAISTGSISLDIALGVGGVPKGRIVEIYGPESSGKTTLCL
HIVAEAQKRGGVAGYIDAEHALDIGYARKLGVRTDDLLLSQPDTGEQALEIAEMLVRSGAIDVLVVDSVAALVPKAELEG
EMGDAHMGVQARLMSQALRKLTGTISKSQTCVIFINQIRMKIGVMFGNPETTTGGNALKFYASQRLDIRRVGAIKNGENV
VGSRTRVKVVKNKVAPPFKEVEFDIMYGTGISKEGDLIDLASNDGIIEKSGSWFSFKGERIGQGRENAKDYLRDHPEVRV
DVEKQVLDKYGIGKPAVAAAPAPAEAEAPAEGHTEKRQRVKAVK

Nucleotide

• Length: 1095 bp

>NTDB_id=384600 F0U60_RS42320 WP_395808610.1 10340319..10341413(-) (recA) [Archangium minus strain Cbm 6]
ATGGCCGTGAATCCAGAGAAGGAGAAGGCGATCGAATTGGCGATGTCCGCTGTGGAGCGCCAGTTCGGTAAGGGGTCCAT
CATGCGGCTCGGCAACGAGGAGCCGCTGGTTCGGGATGTTCAGGCCATTTCGACGGGAAGCATCTCGCTCGACATCGCGC
TGGGCGTTGGCGGCGTGCCCAAGGGCCGCATCGTCGAAATCTACGGGCCGGAGTCTTCCGGTAAGACGACCCTCTGCCTT
CACATCGTGGCCGAGGCGCAGAAGCGCGGCGGCGTGGCCGGCTACATCGACGCCGAGCACGCGCTGGACATTGGCTACGC
GCGCAAGCTGGGCGTGCGCACCGATGACCTGCTGCTGAGCCAGCCGGACACGGGCGAGCAGGCGCTGGAGATCGCCGAGA
TGCTGGTGCGCTCGGGCGCCATCGACGTGCTGGTGGTGGACTCGGTGGCCGCGCTCGTGCCGAAGGCGGAGCTCGAGGGC
GAGATGGGCGATGCGCACATGGGCGTGCAGGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGGTACCATCAGCAA
GAGCCAGACGTGCGTCATCTTCATCAACCAGATCCGCATGAAGATTGGCGTGATGTTCGGCAACCCGGAGACGACGACGG
GCGGTAACGCGCTGAAGTTCTACGCGTCGCAGCGCCTGGACATCCGCCGCGTGGGCGCCATCAAGAACGGCGAGAACGTG
GTGGGCAGCCGTACCCGCGTGAAGGTGGTGAAGAACAAGGTGGCGCCTCCGTTCAAGGAGGTCGAGTTCGACATCATGTA
CGGCACGGGTATTTCGAAGGAGGGCGACCTGATCGATCTGGCGTCGAACGACGGCATCATCGAGAAGAGCGGCAGCTGGT
TCTCCTTCAAGGGCGAGCGCATCGGCCAGGGCCGGGAGAACGCGAAGGACTACCTGCGCGACCACCCGGAGGTGCGCGTG
GACGTGGAGAAGCAGGTGCTGGACAAGTACGGCATCGGCAAGCCGGCCGTGGCCGCCGCCCCGGCTCCGGCCGAGGCCGA
GGCTCCTGCCGAGGGCCACACCGAGAAGCGCCAGCGCGTGAAGGCCGTGAAGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	63.343	93.681	0.593
recA	Latilactobacillus sakei subsp. sakei 23K	65.749	89.835	0.591
recA	Ralstonia pseudosolanacearum GMI1000	67.937	86.538	0.588
recA	Pseudomonas stutzeri DSM 10701	63.127	93.132	0.588
recA	Neisseria gonorrhoeae MS11	60.286	96.154	0.58
recA	Neisseria gonorrhoeae MS11	60.286	96.154	0.58
recA	Neisseria gonorrhoeae strain FA1090	60.286	96.154	0.58
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.123	89.011	0.58
recA	Vibrio cholerae strain A1552	65.123	89.011	0.58
recA	Streptococcus pneumoniae D39	62.538	90.934	0.569
recA	Streptococcus pneumoniae TIGR4	62.538	90.934	0.569
recA	Streptococcus pneumoniae Rx1	62.538	90.934	0.569
recA	Streptococcus pneumoniae R6	62.538	90.934	0.569
recA	Acinetobacter baylyi ADP1	64.486	88.187	0.569
recA	Acinetobacter baumannii D1279779	63.58	89.011	0.566
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.934	90.934	0.563
recA	Streptococcus mitis SK321	61.934	90.934	0.563
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.467	88.736	0.563
recA	Bacillus subtilis subsp. subtilis str. 168	61.446	91.209	0.56
recA	Streptococcus mitis NCTC 12261	61.631	90.934	0.56
recA	Helicobacter pylori strain NCTC11637	64.444	86.538	0.558
recA	Helicobacter pylori 26695	63.81	86.538	0.552
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.542	91.209	0.552
recA	Streptococcus pyogenes NZ131	60.303	90.659	0.547
recA	Streptococcus mutans UA159	59.819	90.934	0.544
recA	Lactococcus lactis subsp. cremoris KW2	58.61	90.934	0.533