Detailed information NTG0384565

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: F0U62_RS10545
• Genome accession: NZ_CP043492
• Coordinates: 2542996..2544090 (+)
• Length: 364 a.a.
• NCBI ID: WP_395855060.1
• Uniprot ID: -
• Organism: Cystobacter fuscus strain Cbf 8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2537996..2549090

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F0U62_RS10530 (F0U62_10545)	-	2538170..2539201 (-)	1032	WP_051256191.1	ribonucleotide-diphosphate reductase subunit beta	-
F0U62_RS10535 (F0U62_10550)	-	2539231..2541621 (-)	2391	WP_395855058.1	ribonucleoside-diphosphate reductase subunit alpha	-
F0U62_RS10540 (F0U62_10555)	-	2542120..2542887 (+)	768	WP_395855059.1	hypothetical protein	-
F0U62_RS10545 (F0U62_10560)	recA	2542996..2544090 (+)	1095	WP_395855060.1	recombinase RecA	Machinery gene
F0U62_RS10550 (F0U62_10565)	-	2544341..2545711 (+)	1371	WP_395855061.1	hypothetical protein	-
F0U62_RS10555 (F0U62_10570)	-	2545740..2546993 (-)	1254	WP_395855062.1	peptidase C39 family protein	-
F0U62_RS10560 (F0U62_10575)	-	2547037..2548434 (-)	1398	WP_395855063.1	M20/M25/M40 family metallo-hydrolase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 39346.14 Da
• Isoelectric Point: 7.3833

>NTDB_id=384565 F0U62_RS10545 WP_395855060.1 2542996..2544090(+) (recA) [Cystobacter fuscus strain Cbf 8]
MAVNPEKEKAIELAMSAVERQFGKGSIMRLGNEEPLVRDVQAISTGSVSLDIALGVGGVPKGRIVEIYGPESSGKTTLCL
HVVAEAQKRGGVAGYIDAEHAMDIGYARKLGVRTDDLLLSQPDTGEQALEIAEMLVRSGAIDVLVVDSVAALVPKAELEG
EMGDAHMGVQARLMSQALRKLTGTISKSQTCVIFINQIRMKIGVMFGNPETTTGGNALKFYASQRLDIRRVGAIKNGENV
VGSRTRVKVVKNKVAPPFKEVEFDIMYGTGISREGDLIDLASTDNIIEKSGSWFSFKGERIGQGRENAKDYLRDHPEVMK
EVERQVYEKYGIGKPAVAAVPPPTDGEPAAEGHTEKRQRVKAVK

Nucleotide

• Length: 1095 bp

>NTDB_id=384565 F0U62_RS10545 WP_395855060.1 2542996..2544090(+) (recA) [Cystobacter fuscus strain Cbf 8]
ATGGCCGTGAATCCGGAGAAGGAGAAGGCGATCGAGTTGGCGATGTCCGCGGTGGAGCGCCAGTTCGGTAAGGGGTCCAT
CATGCGGCTCGGCAACGAGGAGCCGCTGGTGAGGGATGTTCAGGCCATTTCGACGGGAAGCGTCTCGCTCGACATCGCCT
TGGGCGTCGGAGGCGTGCCCAAGGGCCGTATCGTGGAGATCTACGGGCCGGAGTCCTCGGGTAAGACGACGTTGTGCCTC
CATGTGGTGGCCGAGGCGCAGAAGCGCGGCGGCGTGGCGGGCTACATCGACGCCGAGCACGCCATGGACATCGGCTACGC
GCGCAAGTTGGGCGTGCGCACGGATGACCTGCTGCTGAGCCAGCCGGACACCGGTGAGCAGGCGCTGGAGATCGCCGAGA
TGCTGGTGCGCTCGGGCGCCATCGACGTGCTGGTGGTGGACTCGGTGGCCGCGCTCGTGCCGAAGGCGGAGCTCGAGGGC
GAGATGGGCGATGCGCACATGGGCGTGCAGGCGCGCCTCATGAGCCAGGCGCTGCGCAAGCTCACGGGCACCATCAGCAA
GAGCCAGACGTGCGTCATCTTCATCAATCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAACCCCGAGACGACGACGG
GCGGCAACGCGCTGAAGTTCTACGCGTCGCAGCGCCTGGACATCCGCCGCGTGGGCGCCATCAAGAATGGCGAGAACGTG
GTGGGCAGCCGCACCCGCGTGAAGGTGGTGAAGAACAAGGTGGCGCCTCCCTTCAAGGAGGTCGAGTTCGACATCATGTA
CGGCACGGGCATCTCGAGGGAGGGAGACCTCATCGACCTGGCGTCGACGGACAACATCATCGAGAAGAGCGGCAGCTGGT
TCTCCTTCAAGGGAGAACGCATCGGCCAGGGCCGTGAGAACGCCAAGGACTACCTGCGTGACCATCCCGAGGTCATGAAG
GAAGTGGAGCGGCAGGTGTACGAGAAGTACGGCATCGGCAAGCCGGCGGTGGCGGCGGTGCCGCCTCCGACGGATGGCGA
GCCCGCGGCCGAGGGCCACACCGAGAAGCGCCAGCGCGTGAAGGCCGTGAAGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	64.706	93.407	0.604
recA	Ralstonia pseudosolanacearum GMI1000	68.889	86.538	0.596
recA	Pseudomonas stutzeri DSM 10701	62.974	94.231	0.593
recA	Neisseria gonorrhoeae MS11	61.143	96.154	0.588
recA	Neisseria gonorrhoeae strain FA1090	61.143	96.154	0.588
recA	Neisseria gonorrhoeae MS11	61.143	96.154	0.588
recA	Acinetobacter baylyi ADP1	61.561	95.055	0.585
recA	Streptococcus mitis SK321	58.564	99.451	0.582
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.031	89.56	0.582
recA	Vibrio cholerae strain A1552	65.031	89.56	0.582
recA	Glaesserella parasuis strain SC1401	65.231	89.286	0.582
recA	Streptococcus pneumoniae R6	59.104	98.077	0.58
recA	Streptococcus pneumoniae D39	59.104	98.077	0.58
recA	Streptococcus pneumoniae TIGR4	59.104	98.077	0.58
recA	Streptococcus pneumoniae Rx1	59.104	98.077	0.58
recA	Streptococcus mitis NCTC 12261	58.011	99.451	0.577
recA	Acinetobacter baumannii D1279779	63.609	89.835	0.571
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.934	90.934	0.563
recA	Bacillus subtilis subsp. subtilis str. 168	61.446	91.209	0.56
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	63.354	88.462	0.56
recA	Helicobacter pylori strain NCTC11637	61.145	91.209	0.558
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.843	91.209	0.555
recA	Streptococcus pyogenes NZ131	60.909	90.659	0.552
recA	Helicobacter pylori 26695	60.542	91.209	0.552
recA	Streptococcus mutans UA159	59.215	90.934	0.538
recA	Lactococcus lactis subsp. cremoris KW2	58.308	90.934	0.53