Detailed information NTG0384119

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DIU38_RS21090
• Genome accession: NZ_CP043449
• Coordinates: 4990720..4991742 (-)
• Length: 340 a.a.
• NCBI ID: WP_090534412.1
• Uniprot ID: A0A1G4TY85
• Organism: Mucilaginibacter sp. P4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4985720..4996742

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DIU38_RS21070 (DIU38_021070)	-	4986070..4987338 (-)	1269	WP_146750324.1	hypothetical protein	-
DIU38_RS21075 (DIU38_021075)	-	4987416..4988924 (-)	1509	WP_112651390.1	FAD-binding protein	-
DIU38_RS21080 (DIU38_021080)	-	4988931..4989287 (-)	357	WP_112651392.1	Bor/Iss family lipoprotein	-
DIU38_RS21085 (DIU38_021085)	cfa	4989420..4990535 (-)	1116	WP_112651394.1	cyclopropane fatty acyl phospholipid synthase	-
DIU38_RS21090 (DIU38_021090)	recA	4990720..4991742 (-)	1023	WP_090534412.1	recombinase RecA	Machinery gene
DIU38_RS21095 (DIU38_021095)	nth	4991888..4992643 (-)	756	WP_112651396.1	endonuclease III	-
DIU38_RS21100 (DIU38_021100)	-	4992890..4993084 (-)	195	WP_090534406.1	hypothetical protein	-
DIU38_RS21105 (DIU38_021105)	-	4993355..4993939 (-)	585	WP_090534404.1	RNA polymerase sigma factor	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36845.30 Da
• Isoelectric Point: 5.0692

>NTDB_id=384119 DIU38_RS21090 WP_090534412.1 4990720..4991742(-) (recA) [Mucilaginibacter sp. P4]
MANIDKNSADKLKALQLTLDKLEKSYGKGTIMKLGESVVEQTEVISTGSLGLDIALGVNGLPKGRIIEIYGPESSGKTTL
AIHAIAESQKNGGIAAFIDAEHAFDRFYAKKLGVDVENLLISQPDNGEQALEIADNLIRSGAIDILVIDSVAALVPKAEI
EGEMGDSKMGLHARLMSQALRKLTGTISKTGCCCIFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDVRRISQIKDTD
EVSGNRVKVKIVKNKVAPPFRVAEFDIMFGEGISKAGEIIDLGVEYNIIKKAGSWFSYGETRLGQGRDAVKQLILDNPEL
QEELENKIKETVTGESMEEV

Nucleotide

• Length: 1023 bp

>NTDB_id=384119 DIU38_RS21090 WP_090534412.1 4990720..4991742(-) (recA) [Mucilaginibacter sp. P4]
ATGGCTAACATAGATAAAAATAGCGCTGATAAATTGAAGGCATTACAGCTTACGTTAGATAAGCTGGAAAAATCATACGG
TAAAGGTACCATCATGAAATTGGGCGAATCCGTAGTTGAACAAACTGAAGTTATATCAACCGGCTCATTGGGGCTTGATA
TTGCTTTGGGAGTTAACGGTTTGCCTAAAGGAAGGATCATTGAGATCTACGGGCCTGAATCGTCAGGTAAAACAACTTTG
GCTATCCATGCCATTGCCGAATCGCAAAAGAACGGTGGTATTGCCGCCTTTATTGATGCGGAGCACGCTTTCGATCGTTT
TTATGCCAAGAAATTAGGCGTGGATGTTGAAAACCTGCTGATCTCCCAGCCTGATAATGGTGAACAGGCACTGGAAATTG
CCGATAACCTGATCCGTTCGGGCGCTATTGATATTTTGGTTATCGACTCTGTTGCAGCGTTGGTTCCTAAAGCCGAGATA
GAAGGCGAAATGGGCGATTCAAAAATGGGCCTGCATGCACGTTTAATGTCTCAGGCATTACGTAAGCTAACCGGCACTAT
CAGCAAAACAGGATGCTGCTGTATCTTTATTAACCAGCTGCGCGATAAGATCGGTGTTATGTTTGGTAACCCTGAAACCA
CTACTGGTGGTAATGCATTGAAATTTTATGCTTCGGTACGTTTGGATGTACGCCGTATCTCCCAAATTAAAGACACCGAT
GAGGTTTCCGGTAACCGCGTAAAGGTTAAGATCGTTAAGAATAAAGTTGCCCCTCCGTTCCGTGTAGCCGAGTTTGACAT
CATGTTTGGCGAAGGTATTTCAAAAGCCGGTGAGATCATTGACCTCGGTGTTGAATACAACATTATTAAAAAAGCAGGCT
CATGGTTTAGCTATGGCGAAACCCGTTTAGGCCAGGGCCGTGATGCTGTTAAACAACTGATCCTTGATAACCCAGAGCTA
CAGGAAGAATTGGAAAATAAGATCAAAGAAACGGTAACCGGCGAAAGCATGGAAGAAGTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (13-274)

3D structure

• AlphaFold DB: A0A1G4TY85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	71.893	99.412	0.715
recA	Ralstonia pseudosolanacearum GMI1000	69.256	90.882	0.629
recA	Neisseria gonorrhoeae strain FA1090	66.254	95	0.629
recA	Neisseria gonorrhoeae MS11	66.254	95	0.629
recA	Neisseria gonorrhoeae MS11	66.254	95	0.629
recA	Bacillus subtilis subsp. subtilis str. 168	64.596	94.706	0.612
recA	Acinetobacter baumannii D1279779	64.087	95	0.609
recA	Acinetobacter baylyi ADP1	64.087	95	0.609
recA	Helicobacter pylori 26695	63.889	95.294	0.609
recA	Helicobacter pylori strain NCTC11637	63.889	95.294	0.609
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.614	96.765	0.606
recA	Glaesserella parasuis strain SC1401	62.733	94.706	0.594
recA	Streptococcus pneumoniae TIGR4	58.065	100	0.582
recA	Streptococcus pneumoniae Rx1	58.065	100	0.582
recA	Streptococcus pneumoniae D39	58.065	100	0.582
recA	Streptococcus pneumoniae R6	58.065	100	0.582
recA	Streptococcus mitis SK321	60.366	96.471	0.582
recA	Streptococcus mitis NCTC 12261	60.366	96.471	0.582
recA	Latilactobacillus sakei subsp. sakei 23K	61.562	94.118	0.579
recA	Pseudomonas stutzeri DSM 10701	60.938	94.118	0.574
recA	Streptococcus pyogenes NZ131	60.185	95.294	0.574
recA	Lactococcus lactis subsp. cremoris KW2	59.451	96.471	0.574
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.062	95	0.571
recA	Vibrio cholerae strain A1552	60.062	95	0.571
recA	Streptococcus mutans UA159	58.333	95.294	0.556
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.895	95	0.55