Detailed information NTG0038189

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BSUW23_RS08980
• Genome accession: NC_014479
• Coordinates: 1721228..1722274 (+)
• Length: 348 a.a.
• NCBI ID: WP_003221008.1
• Uniprot ID: E0TV17
• Organism: Bacillus spizizenii str. W23
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1716228..1727274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSUW23_RS08950 (BSUW23_08680)	ymfI	1716235..1716963 (+)	729	WP_003220995.1	elongation factor P 5-aminopentanone reductase	-
BSUW23_RS08955 (BSUW23_08685)	-	1717044..1717301 (+)	258	WP_003220996.1	DUF3243 domain-containing protein	-
BSUW23_RS08960 (BSUW23_08690)	-	1717431..1718222 (+)	792	WP_013307981.1	YmfK family protein	-
BSUW23_RS08965 (BSUW23_08695)	rodZ	1718289..1719155 (+)	867	WP_202892724.1	cell shape determination protein RodZ	-
BSUW23_RS08970 (BSUW23_08700)	pgsA	1719206..1719787 (+)	582	WP_003221002.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
BSUW23_RS08975 (BSUW23_08705)	cinA	1719805..1721055 (+)	1251	WP_003221005.1	competence/damage-inducible protein A	Machinery gene
BSUW23_RS08980 (BSUW23_08710)	recA	1721228..1722274 (+)	1047	WP_003221008.1	recombinase RecA	Machinery gene
BSUW23_RS08985 (BSUW23_08715)	-	1722444..1723619 (+)	1176	WP_003221009.1	serine hydrolase	-
BSUW23_RS08990 (BSUW23_08720)	rny	1723895..1725457 (+)	1563	WP_003221010.1	ribonuclease Y	-
BSUW23_RS08995 (BSUW23_08725)	ymdB	1725527..1726321 (+)	795	WP_013307982.1	2',3'-cyclic-nucleotide 2'-phosphodiesterase	-
BSUW23_RS09000 (BSUW23_08730)	spoVS	1726520..1726780 (+)	261	WP_003154135.1	stage V sporulation protein SpoVS	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37954.07 Da
• Isoelectric Point: 4.8458

>NTDB_id=38189 BSUW23_RS08980 WP_003221008.1 1721228..1722274(+) (recA) [Bacillus spizizenii str. W23]
MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQQQGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGRENAKQFLKENKDIMLMIQEQ
IREHYGLDNHGAAQQQAGETQEELEFEE

Nucleotide

• Length: 1047 bp

>NTDB_id=38189 BSUW23_RS08980 WP_003221008.1 1721228..1722274(+) (recA) [Bacillus spizizenii str. W23]
ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAACAAATAGAAAAACAGTTCGGCAAAGGTTCTATTATGAAACT
GGGAGAAAAGACAGATACAAGAATTTCTACTGTCCCAAGCGGCTCCCTCGCTCTTGATACAGCACTAGGAATTGGCGGAT
ATCCGCGCGGACGGATTATTGAAGTATATGGTCCTGAAAGCTCAGGTAAAACAACTGTGGCGCTTCATGCGATTGCTGAG
GTTCAGCAGCAGGGCGGACAAGCCGCGTTTATCGATGCGGAGCATGCGTTAGATCCGGTATACGCGCAAAAGCTTGGAGT
CAATATCGAAGAGCTTTTACTGTCTCAGCCTGACACAGGTGAGCAGGCGCTTGAAATTGCGGAAGCGCTGGTTCGAAGCG
GTGCAGTTGACATTGTTGTTGTCGACTCTGTGGCGGCTCTCGTTCCGAAAGCGGAAATTGAAGGCGACATGGGAGATTCG
CATGTCGGTTTACAAGCTCGCTTAATGTCTCAAGCGCTTCGTAAGCTTTCAGGGGCCATTAACAAATCGAAGACAATCGC
GATTTTCATTAACCAAATTCGTGAAAAAGTCGGCGTTATGTTCGGGAACCCGGAAACAACTCCTGGCGGCCGCGCGCTGA
AATTCTACTCTTCCGTGCGTCTTGAAGTGCGCCGTGCTGAACAGCTGAAACAAGGCAACGACGTAATGGGGAACAAAACG
AAAATCAAAGTCGTGAAAAACAAGGTAGCTCCGCCGTTCCGTACAGCCGAGGTTGACATTATGTACGGAGAAGGCATCTC
AAAAGAAGGCGAAATCATTGATCTTGGAACTGAACTTGATATCGTGCAAAAAAGCGGTTCATGGTATTCTTATGAAGAAG
AGCGTCTTGGCCAAGGCCGTGAAAATGCAAAACAATTCTTGAAAGAAAATAAAGATATCATGCTGATGATCCAGGAGCAA
ATTCGCGAACATTACGGCTTGGATAATCACGGAGCAGCGCAGCAGCAAGCTGGAGAGACACAAGAAGAACTCGAATTTGA
AGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: E0TV17

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	98.851	100	0.989
recA	Latilactobacillus sakei subsp. sakei 23K	74.924	93.966	0.704
recA	Streptococcus pneumoniae R6	65.909	100	0.667
recA	Streptococcus pneumoniae Rx1	65.909	100	0.667
recA	Streptococcus pneumoniae D39	65.909	100	0.667
recA	Streptococcus pneumoniae TIGR4	65.909	100	0.667
recA	Streptococcus mitis SK321	66.86	98.851	0.661
recA	Streptococcus mitis NCTC 12261	68.788	94.828	0.652
recA	Streptococcus mutans UA159	68.389	94.54	0.647
recA	Streptococcus pyogenes NZ131	67.683	94.253	0.638
recA	Neisseria gonorrhoeae strain FA1090	63.478	99.138	0.629
recA	Neisseria gonorrhoeae MS11	63.478	99.138	0.629
recA	Neisseria gonorrhoeae MS11	63.478	99.138	0.629
recA	Lactococcus lactis subsp. cremoris KW2	65.758	94.828	0.624
recA	Helicobacter pylori 26695	65.231	93.391	0.609
recA	Helicobacter pylori strain NCTC11637	65.231	93.391	0.609
recA	Acinetobacter baylyi ADP1	60.231	99.713	0.601
recA	Ralstonia pseudosolanacearum GMI1000	65.723	91.379	0.601
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.914	93.966	0.601
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.914	93.966	0.601
recA	Glaesserella parasuis strain SC1401	60	99.138	0.595
recA	Acinetobacter baumannii D1279779	59.71	99.138	0.592
recA	Vibrio cholerae strain A1552	63.863	92.241	0.589
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.863	92.241	0.589
recA	Pseudomonas stutzeri DSM 10701	62.813	91.954	0.578
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.681	92.816	0.563