Detailed information NTG0379393

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: UC8_RS10480
• Genome accession: NZ_CP042914
• Coordinates: 2969132..2970268 (-)
• Length: 378 a.a.
• NCBI ID: WP_068141245.1
• Uniprot ID: A0A5B9QQF4
• Organism: Roseimaritima ulvae strain UC8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2964132..2975268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UC8_RS10470 (UC8_21430)	-	2967764..2968567 (+)	804	WP_148080213.1	hypothetical protein	-
UC8_RS10475	-	2968495..2969145 (-)	651	WP_162276008.1	DNA polymerase ligase N-terminal domain-containing protein	-
UC8_RS10480 (UC8_21450)	recA	2969132..2970268 (-)	1137	WP_068141245.1	recombinase RecA	Machinery gene
UC8_RS10485 (UC8_21460)	-	2970609..2970971 (+)	363	WP_068141246.1	2Fe-2S iron-sulfur cluster-binding protein	-
UC8_RS10490 (UC8_21470)	-	2971069..2973939 (-)	2871	WP_148080214.1	DUF11 domain-containing protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 40294.19 Da
• Isoelectric Point: 5.7934

>NTDB_id=379393 UC8_RS10480 WP_068141245.1 2969132..2970268(-) (recA) [Roseimaritima ulvae strain UC8]
MAKKKATTSSARTKSKVDGADPGLKAILEREPGLKTTLQQIDKAFGDGAIMPLGASTNLTIEGIPTGSLSLDMALGGQGI
PRGRIIEVFGPESSGKTTLALHVCAEAQKQSGIAAIIDAEHAFDPSWAKKLGVELDTLLVSQPGSGEEAMQICEMLVKSN
AVDVIVIDSVAALVPRKELEGEIGDSHVGLQARLMSQAMRKLTGAIAKSKCAVIFINQIREKVGVMFGSPETTPGGRALK
FYCSCRIDVRRIGALKDGDEQVGQRVKAKIVKNKVAPPFRVAEFDMMHSNGISYEGDVLDLGTTHKIVNRSGAWFKLGDT
YLGQGKEKARNFLIENPEICEGIRQKVMEVGGFAAPMDEPNTEDSDADVADEEAVGNS

Nucleotide

• Length: 1137 bp

>NTDB_id=379393 UC8_RS10480 WP_068141245.1 2969132..2970268(-) (recA) [Roseimaritima ulvae strain UC8]
ATGGCTAAGAAAAAAGCGACCACGAGCAGTGCACGGACGAAATCCAAAGTGGACGGCGCCGATCCGGGCTTGAAAGCGAT
TTTGGAGCGCGAGCCGGGGCTGAAAACGACGCTTCAGCAGATCGACAAGGCATTTGGCGATGGTGCCATCATGCCACTGG
GGGCGTCGACCAATCTGACCATCGAAGGCATCCCCACCGGCTCGCTCAGCCTGGACATGGCCCTGGGTGGCCAGGGGATT
CCCCGCGGCCGCATCATCGAAGTGTTTGGCCCGGAATCGAGCGGTAAAACGACGCTGGCGCTGCACGTCTGTGCGGAAGC
TCAAAAGCAGAGCGGGATCGCGGCGATTATCGATGCCGAACACGCCTTCGACCCCAGCTGGGCGAAAAAGCTGGGCGTCG
AACTGGACACCCTGCTGGTCAGCCAACCCGGCAGCGGGGAAGAAGCCATGCAGATCTGCGAGATGCTAGTTAAAAGCAAC
GCGGTCGATGTGATCGTGATCGACTCGGTCGCCGCCCTGGTTCCCAGGAAGGAACTGGAAGGCGAGATCGGAGATAGCCA
CGTCGGCCTGCAGGCTCGCTTGATGAGCCAGGCGATGCGGAAACTGACCGGTGCGATTGCCAAAAGCAAGTGTGCGGTGA
TCTTCATCAACCAAATCCGCGAAAAGGTCGGGGTGATGTTCGGCAGCCCGGAAACGACCCCCGGCGGACGCGCTTTGAAG
TTCTATTGCTCCTGCCGTATCGACGTCCGCCGGATTGGCGCCTTGAAGGACGGCGACGAACAGGTCGGCCAACGCGTCAA
AGCGAAAATCGTCAAGAACAAGGTCGCGCCTCCGTTCCGCGTGGCCGAATTCGACATGATGCACAGCAATGGCATCAGTT
ACGAAGGCGACGTGCTGGACTTGGGTACCACCCACAAGATCGTCAATCGCAGCGGTGCCTGGTTCAAACTGGGCGATACC
TACCTTGGACAGGGCAAAGAGAAAGCTCGCAACTTCCTGATCGAGAATCCCGAAATCTGTGAAGGGATTCGCCAGAAAGT
GATGGAAGTGGGCGGCTTTGCGGCTCCCATGGACGAACCCAACACCGAAGACAGCGACGCCGACGTGGCCGATGAGGAAG
CCGTTGGCAACAGCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (34-293)

3D structure

• AlphaFold DB: A0A5B9QQF4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	60.923	85.979	0.524
recA	Streptococcus pneumoniae R6	53.824	93.386	0.503
recA	Streptococcus pneumoniae Rx1	53.824	93.386	0.503
recA	Streptococcus pneumoniae D39	53.824	93.386	0.503
recA	Streptococcus pneumoniae TIGR4	53.824	93.386	0.503
recA	Lactococcus lactis subsp. cremoris KW2	55.072	91.27	0.503
recA	Pseudomonas stutzeri DSM 10701	58.491	84.127	0.492
recA	Neisseria gonorrhoeae MS11	55.09	88.36	0.487
recA	Neisseria gonorrhoeae strain FA1090	55.09	88.36	0.487
recA	Neisseria gonorrhoeae MS11	55.09	88.36	0.487
recA	Latilactobacillus sakei subsp. sakei 23K	53.644	90.741	0.487
recA	Vibrio cholerae strain A1552	57.009	84.921	0.484
recA	Vibrio cholerae O1 biovar El Tor strain E7946	57.009	84.921	0.484
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.053	84.392	0.481
recA	Streptococcus mutans UA159	53.529	89.947	0.481
recA	Glaesserella parasuis strain SC1401	56.74	84.392	0.479
recA	Ralstonia pseudosolanacearum GMI1000	58.576	81.746	0.479
recA	Streptococcus mitis NCTC 12261	56.037	85.45	0.479
recA	Streptococcus mitis SK321	55.728	85.45	0.476
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	55.046	86.508	0.476
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	55.452	84.921	0.471
recA	Streptococcus pyogenes NZ131	54.799	85.45	0.468
recA	Helicobacter pylori strain NCTC11637	54.969	85.185	0.468
recA	Acinetobacter baylyi ADP1	55	84.656	0.466
recA	Acinetobacter baumannii D1279779	55	84.656	0.466
recA	Helicobacter pylori 26695	54.658	85.185	0.466